T4SS ID	621
Strain	Staphylococcus aureus subsp. aureus MRSA252
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_002952
Location	1354503..1362012
Name	Ydd
Function	conjugation
Classification	Type IVD; Type GP
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	YdcQ	YddB	YddC	YddD	YddE	YddG	YddH
Number	1	1	1	1	1	1	0

The information of T4SS components from NC_002952
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SAR1285	1350840..1351037 [+], 198	49483473	hypothetical protein
2	SAR1288	1352458..1352814 [-], 357	49483474	lipoprotein
3	SAR1289	1352870..1353460 [-], 591	49483475	hypothetical protein
4	SAR1290	1353467..1354453 [-], 987	49483476	hypothetical protein
5	SAR1291	1354503..1356350 [-], 1848	49483477	hypothetical protein	YddG
6	SAR1292	1356355..1357713 [-], 1359	49483478	FtsK/SpoIIIE family protein	YdcQ
7	SAR1293	1357767..1360262 [-], 2496	49483479	hypothetical protein	YddE
8	SAR1294	1360297..1360680 [-], 384	49483480	hypothetical protein	YddD
9	SAR1295	1360692..1360952 [-], 261	49483481	hypothetical protein	YddC
10	SAR1296	1360957..1362012 [-], 1056	49483482	hypothetical protein	YddB
11	SAR1297	1362073..1363098 [-], 1026	49483483	hypothetical protein
12	SAR1298	1363340..1363642 [-], 303	49483484	hypothetical protein
13	SAR1299	1363656..1363976 [-], 321	49483485	hypothetical protein
14	SAR1300	1364127..1364420 [-], 294	49483486	hypothetical protein
15	SAR1302	1365097..1365309 [+], 213	49483487	hypothetical protein
16	SAR1303	1365606..1365812 [+], 207	49483488	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICESauMRSA252-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation