 T4SS ID | 618 |
| Strain | Bacillus atrophaeus 1942 |
| Replicon | chromosome [Browse all T4SS(s) in this replicon] |
| Accession | NC_014639 |
| Location | 1272..16289 |
| Name | Ydd |
| Function | conjugation |
| Classification | Type IVD; Type GP |
 Bioinformatics investigation has been performed on this T4SS. | |
T4SS components |
| Component | YdcQ | YddB | YddC | YddD | YddE | YddG | YddH |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
The information of T4SS components from NC_014639 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | BATR1942_00010 | 277..837 [-], 561 | 311066970 | hypothetical protein | ||
| 2 | BATR1942_00015 | 1272..2636 [+], 1365 | 311066971 | DNA wielding protein; mobile element region | YdcQ | |
| 3 | BATR1942_00020 | 2646..3704 [+], 1059 | 311066972 | replication protein; mobile element region | ||
| 4 | BATR1942_00025 | 3968..4240 [+], 273 | 311066973 | hypothetical protein | ||
| 5 | BATR1942_00030 | 4227..4793 [-], 567 | 311066974 | hypothetical protein | ||
| 6 | BATR1942_00035 | 4867..5043 [-], 177 | 311066975 | hypothetical protein | ||
| 7 | BATR1942_00040 | 5123..5389 [+], 267 | 311066976 | hypothetical protein | ||
| 8 | BATR1942_00045 | 5412..5519 [-], 108 | 311066977 | hypothetical protein | ||
| 9 | BATR1942_00050 | 5701..6459 [+], 759 | 311066978 | hypothetical protein | ||
| 10 | BATR1942_00055 | 6800..6988 [-], 189 | 311066979 | hypothetical protein | ||
| 11 | BATR1942_00060 | 7083..7361 [+], 279 | 311066980 | hypothetical protein | ||
| 12 | BATR1942_00065 | 7379..7528 [+], 150 | 311066981 | hypothetical protein | ||
| 13 | BATR1942_00070 | 7556..8620 [+], 1065 | 311066982 | hypothetical protein | YddB | |
| 14 | BATR1942_00075 | 8632..8880 [+], 249 | 311066983 | hypothetical protein | YddC | |
| 15 | BATR1942_00080 | 8893..9417 [+], 525 | 311066984 | hypothetical protein | YddD | |
| 16 | BATR1942_00085 | 9407..11800 [+], 2394 | 311066985 | hypothetical protein | YddE | |
| 17 | BATR1942_00090 | 11818..12033 [+], 216 | 311066986 | hypothetical protein | ||
| 18 | BATR1942_00095 | 12157..14592 [+], 2436 | 311066987 | hypothetical protein | YddG | |
| 19 | BATR1942_00100 | 14626..15219 [-], 594 | 311066988 | hypothetical protein | ||
| 20 | BATR1942_00105 | 15327..16289 [+], 963 | 311066989 | cell wall hydrolase; mobile element region | YddH | |
| 21 | BATR1942_00110 | 16304..16807 [+], 504 | 311066990 | hypothetical protein | ||
| 22 | BATR1942_00115 | 16872..17255 [+], 384 | 311066991 | lipoprotein | ||
| 23 | BATR1942_00120 | 17473..18591 [+], 1119 | 311066992 | hypothetical protein | ||
| 24 | BATR1942_00125 | 18851..20026 [+], 1176 | 311066993 | response regulator aspartate phosphatase; mobile element region | ||
| 25 | BATR1942_00130 | 20568..20945 [+], 378 | 311066994 | hypothetical protein | ||
| 26 | BATR1942_00135 | 20962..21138 [+], 177 | 311066995 | hypothetical protein | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
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(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]
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| This literature contains bioinformatics investigation |