 T4SS ID | 617 |
| Strain | Bacillus subtilis subsp. subtilis str. 168 |
| Replicon | chromosome [Browse all T4SS(s) in this replicon] |
| Accession | NC_000964 |
| Location | 533338..545011 |
| Name | Ydd |
| Function | conjugation |
| Classification | Type IVD; Type GP |
 Experimental investigation has been performed on this T4SS. | |
T4SS components |
| Component | YdcQ | YddB | YddC | YddD | YddE | YddG | YddH |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
The information of T4SS components from NC_000964 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | BSU04800 (ydcL) | 529505..530611 [-], 1107 | 16077547 | phage integrase | ||
| 2 | BSU04810 (immA) | 530624..531133 [-], 510 | 16077548 | immunity anti-repressor | ||
| 3 | BSU04820 (immR) | 531130..531513 [-], 384 | 16077549 | XRE family transcriptional regulator | ||
| 4 | BSU04830 (sacV) | 531787..531981 [+], 195 | 16077550 | transcriptional regulator | ||
| 5 | BSU04839 (ydzL) | 531978..532238 [+], 261 | 255767138 | hypothetical protein | ||
| 6 | BSU04840 (ydcO) | 532292..532552 [+], 261 | 16077551 | hypothetical protein | ||
| 7 | BSU04850 (ydcP) | 532922..533302 [+], 381 | 16077552 | hypothetical protein | ||
| 8 | BSU04860 (ydcQ) | 533338..534780 [+], 1443 | 16077553 | DNA wielding protein | YdcQ | |
| 9 | BSU04870 (ydcR) | 534773..535831 [+], 1059 | 16077554 | replication protein | ||
| 10 | BSU04880 (ydcS) | 536096..536365 [+], 270 | 16077555 | hypothetical protein | ||
| 11 | BSU04890 (ydcT) | 536404..536670 [+], 267 | 16077556 | hypothetical protein | ||
| 12 | BSU04900 (yddA) | 536687..536995 [+], 309 | 16077557 | hypothetical protein | ||
| 13 | BSU04910 (yddB) | 536985..538049 [+], 1065 | 16077558 | hypothetical protein | YddB | |
| 14 | BSU04920 (yddC) | 538061..538309 [+], 249 | 16077559 | hypothetical protein | YddC | |
| 15 | BSU04930 (yddD) | 538322..538846 [+], 525 | 16077560 | hypothetical protein | YddD | |
| 16 | BSU04940 (yddE) | 538836..541229 [+], 2394 | 255767139 | hypothetical protein | YddE | |
| 17 | BSU04950 (yddF) | 541248..541574 [+], 327 | 16077562 | hypothetical protein | ||
| 18 | BSU04960 (yddG) | 541578..544025 [+], 2448 | 16077563 | hypothetical protein | YddG | |
| 19 | BSU04970 (yddH) | 544022..545011 [+], 990 | 16077564 | cell wall hydrolase | YddH | |
| 20 | BSU04980 (yddI) | 545026..545532 [+], 507 | 16077565 | hypothetical protein | ||
| 21 | BSU04990 (yddJ) | 545595..545975 [+], 381 | 16077566 | lipoprotein | ||
| 22 | BSU05000 (yddK) | 546166..546966 [-], 801 | 16077567 | hypothetical protein | ||
| 23 | BSU05010 (rapI) | 547306..548481 [+], 1176 | 16077568 | response regulator aspartate phosphatase | ||
| 24 | BSU05020 (phrI) | 548438..548557 [+], 120 | 16077569 | secreted regulator of the activity of phosphatase RapI | ||
| 25 | BSU05030 (yddM) | 548710..549651 [+], 942 | 16077570 | helicase | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
| (1) Berkmen MB; Lee CA; Loveday EK; Grossman AD (2010). Polar positioning of a conjugation protein from the integrative and conjugative element ICEBs1 of Bacillus subtilis. J Bacteriol. 192(1):38-45. [PudMed:19734305] |