Strainuncultured bacterium plasmid pB4 (NC_003430)
Repliconplasmid pB4 [Browse all T4SS(s) in this replicon]
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components

The information of T4SS components from NC_003430
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pB4p42 (trfA1)39425..40648 [-], 122419352381TrfA1 
2pB4p43 (trfA2)39425..40294 [-], 87019352382TrfA2 protein 
3pB4p44 (ssb)40697..41035 [-], 33919352383Ssb protein 
4pB4p45 (trbA)41145..41504 [+], 36019352384conjugal transfer protein TrbA 
5pB4p46 (trbB)41819..42784 [+], 96619352385conjugal transfer ATPase TrbB  TrbB
6pB4p47 (trbC)42798..43262 [+], 46519352386conjugal transfer protein TrbC  TrbC
7pB4p48 (trbD)43266..43577 [+], 31219352387conjugal transfer protein TrbD  TrbD
8pB4p49 (trbE)43574..46132 [+], 255919352388conjugal transfer protein TrbE  TrbE
9pB4p50 (trbF)46129..46917 [+], 78919352389conjugal transfer protein TrbF  TrbF
10pB4p51 (trbG)46914..47828 [+], 91519352390conjugal transfer protein TrbG  TrbG
11pB4p52 (trbH)47831..48292 [+], 46219352391conjugal transfer protein TrbH  TrbH
12pB4p53 (trbI)48296..49678 [+], 138319352392conjugal transfer protein TrbI  TrbI
13pB4p54 (trbJ)49695..50468 [+], 77419352393conjugal transfer protein TrbJ  TrbJ
14pB4p55 (trbK)50478..50696 [+], 21919352394TrbK protein  TrbK
15pB4p56 (trbL)50708..52420 [+], 171319352395TrbL protein  TrbL
16pB4p57 (trbM)52438..53016 [+], 57919352396conjugal transfer protein TrbM 
17pB4p58 (trbN)53018..53653 [+], 63619352397conjugal transfer protein TrbN  TrbN
18pB4p59 (trbO)53683..53952 [+], 27019352398TrbO protein 
19pB4p60 (trbP)53964..54647 [+], 68419352399conjugal transfer protein TrbP 
20pB4p61 (upf30.5)54663..55106 [+], 44419352400hypothetical protein 
21pB4p62 (upfA)55130..55411 [+], 28219352401UpfA protein 
22pB4p63 (upf31.0)55607..56281 [+], 67519352402hypothetical protein 
23pB4p64 (upfB)56337..56885 [+], 54919352403UpfB protein 
24pB4p65 (parA)56854..57326 [-], 47319352404ParA protein 
25pB4p66 (blaNPS-1)57504..58286 [+], 78319352405beta-lactam resistance protein 
26pB4p67 (tniC)58385..59008 [-], 62419352406TniC protein 
27pB4p68 (traC2)59555..64150 [-], 459619352407TraC2 protein 
28pB4p69 (traD)64154..64552 [-], 39919352408TraD protein 
29pB4p70 (traE)64571..66634 [-], 206419352409TraE protein 
30pB4p71 (traF)66649..67185 [-], 53719352410conjugal transfer peptidase TraF  TraF
31pB4p72 (traG)67182..69086 [-], 190519352411conjugal transfer coupling protein TraG  TraG
32pB4p73 (traI)69083..71341 [-], 225919352412conjugal transfer relaxase TraI 
33pB4p74 (traH)69385..69795 [-], 41119352413TraH protein 
34pB4p7571338..71379 [-], 4219352414hypothetical protein 
35pB4p76 (traJ)71376..71747 [-], 37219352415conjugal transfer relaxosome component TraJ 
36pB4p77 (traK)72308..72721 [+], 41419352416TraK protein 
37pB4p78 (traL)72721..73446 [+], 72619352417conjugal transfer protein TraL 
38pB4p79 (traM)73446..73886 [+], 44119352418conjugal transfer protein TraM 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Tauch A; Schluter A; Bischoff N; Goesmann A; Meyer F; Puhler A (2003). The 79,370-bp conjugative plasmid pB4 consists of an IncP-1beta backbone loaded with a chromate resistance transposon, the strA-strB streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), and a tripartite antibiotic efflux system of the resistance-nodulation-division family. Mol Genet Genomics. 268(5):570-84. [PudMed:12589432]