SecReT4

T4SS
References

T4SS ID	58
Strain	Comamonas testosteroni CNB-1
Replicon	plasmid pCNB [Browse all T4SS(s) in this replicon]
Accession	NC_010935
Location	19873..31730; 85501..87938
Name	Trb
Function	Conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	1	1	1	1	1

The information of T4SS components from NC_010935
Region 1: 19873..31730

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pCNB_p22 (padR)	15512..15817 [-], 306	190571942	PadR
2	pCNB_p23 (chrA)	15828..17033 [-], 1206	190571943	chromate transporter
3	pCNB_p24 (trfA1)	17479..18702 [-], 1224	190571944	TrfA1
4	pCNB_p25 (ssb)	18751..19089 [-], 339	190571945	Ssb
5	pCNB_p26 (trbA)	19181..19558 [+], 378	190571946	TrbA
6	pCNB_p27 (trbB)	19873..20838 [+], 966	190571947	TrbB	TrbB
7	pCNB_p28 (trbC)	20868..21332 [+], 465	190571948	TrbC	TrbC
8	pCNB_p29 (trbD)	21336..21647 [+], 312	190571949	TrbD	TrbD
9	pCNB_p30 (trbE)	21644..24202 [+], 2559	190571950	TrbE	TrbE
10	pCNB_p31 (trbF)	24199..24987 [+], 789	190571951	TrbF	TrbF
11	pCNB_p32 (trbG)	24984..25898 [+], 915	190571952	TrbG	TrbG
12	pCNB_p33 (trbH)	25901..26362 [+], 462	190571953	TrbH	TrbH
13	pCNB_p34 (trbI)	26366..27745 [+], 1380	190571954	TrbI	TrbI
14	pCNB_p35 (trbJ)	27762..28535 [+], 774	190571955	TrbJ	TrbJ
15	pCNB_p36 (trbK)	28545..28766 [+], 222	190571956	TrbK	TrbK
16	pCNB_p37 (trbL)	28778..30496 [+], 1719	190571957	TrbL	TrbL
17	pCNB_p38 (trbM)	30515..31093 [+], 579	190571958	TrbM
18	pCNB_p39 (trbN)	31095..31730 [+], 636	190571959	TrbN	TrbN
19	pCNB_p40 (trbO)	31760..32029 [+], 270	190571960	TrbO
20	pCNB_p41 (trbP)	32026..32724 [+], 699	190571961	TrbP
21	pCNB_p42	32740..33183 [+], 444	190571962	hypothetical protein
22	pCNB_p43	33286..33702 [+], 417	190571963	major outer membrane lipoprotein

Region 2: 85501..87938

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pCNB_p86 (traD)	83009..83401 [-], 393	190572001	conjugal transfer protein TraD
2	pCNB_p87 (traE)	83426..85486 [-], 2061	190572002	DNA topoisomerase
3	pCNB_p88 (traF)	85501..86037 [-], 537	190572003	TraF	TraF
4	pCNB_p89 (traG)	86034..87938 [-], 1905	190572004	TraG	TraG
5	pCNB_p90 (traI)	87935..90193 [-], 2259	190572005	DNA relaxase
6	pCNB_p91 (traJ)	90228..90599 [-], 372	190572006	conjugal transfer protein
7	pCNB_p92	90604..90825 [-], 222	190572007	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Ma YF; Wu JF; Wang SY; Jiang CY; Zhang Y; Qi SW; Liu L; Zhao GP; Liu SJ (2007). Nucleotide sequence of plasmid pCNB1 from comamonas strain CNB-1 reveals novel genetic organization and evolution for 4-chloronitrobenzene degradation. Appl Environ Microbiol. 73(14):4477-83. [PudMed:17526790]