SecReT4

T4SS
References

T4SS ID	50
Strain	Nitrosomonas sp. AL212 plasmid pNAL21201 (NC_015223)
Replicon	plasmid pNAL21201 [Browse all T4SS(s) in this replicon]
Accession	NC_015223
Location	29483..39971; 56684..59088
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	1	1

The information of T4SS components from NC_015223
Region 1: 29483..39971

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	NAL212_0024	28776..29195 [-], 420	325983735	flagellar basal-body rod protein FlgB
2	NAL212_0025	29483..29923 [-], 441	325983736	Lytic transglycosylase catalytic	TrbN
3	NAL212_0026	29955..31043 [-], 1089	325983737	P-type conjugative transfer protein TrbL	TrbL
4	NAL212_0027	31076..31267 [-], 192	325983738	hypothetical protein
5	NAL212_0028	31291..32091 [-], 801	325983739	P-type conjugative transfer protein TrbJ	TrbJ
6	NAL212_0029	32109..33521 [-], 1413	325983740	conjugation TrbI family protein	TrbI
7	NAL212_0030	33534..34031 [-], 498	325983741	Conjugal transfer TrbH family protein	TrbH
8	NAL212_0031	34034..34942 [-], 909	325983742	P-type conjugative transfer protein TrbG	TrbG
9	NAL212_0032	34957..35733 [-], 777	325983743	VirB8 family protein	TrbF
10	NAL212_0033	35733..38267 [-], 2535	325983744	type IV secretion/conjugal transfer ATPase	TrbE
11	NAL212_0034	38264..38575 [-], 312	325983745	type IV secretory pathway VirB3 family protein	TrbD
12	NAL212_0035	38595..38990 [-], 396	325983746	conjugal transfer protein Trbc	TrbC
13	NAL212_0036	39012..39971 [-], 960	325983747	P-type conjugative transfer ATPase TrbB	TrbB
14	NAL212_0037	40058..40420 [-], 363	325983748	helix-turn-helix domain-containing protein
15	NAL212_0038	40849..41913 [+], 1065	325983749	parB-like partition protein
16	NAL212_0039	41910..42275 [+], 366	325983750	putative conjugation protein TraO
17	NAL212_0040	42481..42606 [+], 126	325983751	hypothetical protein
18	NAL212_0041	42787..44199 [-], 1413	325983752	hypothetical protein
19	NAL212_0042	44343..44927 [-], 585	325983753	cytochrome c, class I

Region 2: 56684..59088

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	NAL212_0050	52808..53251 [-], 444	325983759	TraM protein
2	NAL212_0051	53248..53979 [-], 732	325983760	Cobyrinic acid ac-diamide synthase
3	NAL212_0052	53979..54320 [-], 342	325983761	hypothetical protein
4	NAL212_0053	54690..55043 [+], 354	325983762	conjugal transfer relaxosome component TraJ
5	NAL212_0054	55059..56684 [+], 1626	325983763	Relaxase/mobilization nuclease family protein
6	NAL212_0055	56684..58552 [+], 1869	325983764	TRAG family protein	TraG
7	NAL212_0056	58549..59088 [+], 540	325983765	conjugative transfer signal peptidase TraF	TraF
8	NAL212_0057	59114..59332 [+], 219	325983766	conjugal transfer protein
9	NAL212_0058	59319..62231 [+], 2913	325983767	hypothetical protein
10	NAL212_0059	62365..62745 [+], 381	325983768	hypothetical protein
11	NAL212_0060	62732..63046 [+], 315	325983769	XRE family transcriptional regulator
12	NAL212_0061	63103..63408 [+], 306	325983770	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_015223