SecReT4

T4SS
References

T4SS ID	354
Strain	Parvularcula bermudensis HTCC2503
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_014414
Location	1082486..1098328
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	0	1

The information of T4SS components from NC_014414

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	PB2503_05657	1080175..1080777 [-], 603	304320703	hypothetical protein
2	PB2503_05662	1080774..1081391 [-], 618	304320704	hypothetical protein
3	PB2503_05667	1081388..1082254 [-], 867	304320705	hypothetical protein
4	PB2503_05672	1082486..1084447 [+], 1962	304320706	conjugal transfer protein TraG	TraG
5	PB2503_05677	1084451..1084867 [+], 417	304320707	hypothetical protein
6	PB2503_05682	1084951..1087662 [+], 2712	304320708	hypothetical protein
7	PB2503_12549	1088341..1089129 [+], 789	304320709	transposase orfB
8	PB2503_05697	1089230..1090225 [+], 996	304320710	conjugal transfer protein TrbB	TrbB
9	PB2503_05702	1090222..1090557 [+], 336	304320711	conjugal transfer protein Trbc	TrbC
10	PB2503_05707	1090557..1090811 [+], 255	304320712	conjugal transfer trbd transmembrane protein	TrbD
11	PB2503_05712	1090805..1093276 [+], 2472	304320713	conjugal transfer protein Trbe	TrbE
12	PB2503_05717	1093286..1093984 [+], 699	304320714	conjugal transfer protein trbJ	TrbJ
13	PB2503_05722	1093991..1095307 [+], 1317	304320715	conjugal transfer protein	TrbL
14	PB2503_05727	1095311..1096003 [+], 693	304320716	conjugal transfer protein TrbF	TrbF
15	PB2503_05732	1096009..1097046 [+], 1038	304320717	conjugal transfer protein TrbG	TrbG
16	PB2503_05737	1097051..1098328 [+], 1278	304320718	conjugal transfer protein TrbI	TrbI
17	PB2503_05742	1098325..1098561 [+], 237	304320719	hypothetical protein
18	PB2503_05747	1098566..1098868 [+], 303	304320720	hypothetical protein
19	PB2503_05752	1098871..1100034 [-], 1164	304320721	hypothetical protein
20	PB2503_05757	1100034..1102334 [-], 2301	304320722	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Oh HM; Kang I; Vergin KL; Kang D; Rhee KH; Giovannoni SJ; Cho JC (2011). Complete genome sequence of strain HTCC2503T of Parvularcula bermudensis, the type species of the order "Parvularculales" in the class Alphaproteobacteria. J Bacteriol. 193(1):305-6. [PudMed:21037002]