SecReT4

T4SS
References

T4SS ID	341
Strain	Parvibaculum lavamentivorans DS-1
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_009719
Location	3780267..3795017
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	0	1

The information of T4SS components from NC_009719

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Plav_3529	3775762..3776292 [+], 531	154253960	hypothetical protein
2	Plav_3530	3776429..3776710 [+], 282	154253961	hypothetical protein
3	Plav_3531	3776729..3777889 [+], 1161	154253962	replication protein A
4	Plav_3532	3777886..3778539 [+], 654	154253963	cobyrinic acid ac-diamide synthase
5	Plav_3533	3778536..3778787 [+], 252	154253964	hypothetical protein
6	Plav_3534	3778784..3779305 [+], 522	154253965	hypothetical protein
7	Plav_3535	3779302..3779847 [+], 546	154253966	conjugal transfer protein
8	Plav_3536	3779844..3780263 [+], 420	154253967	hypothetical protein
9	Plav_3537	3780267..3781046 [+], 780	154253968	lytic transglycosylase catalytic subunit	TrbN
10	Plav_3538	3781290..3783029 [+], 1740	154253969	hypothetical protein
11	Plav_3539	3783056..3785047 [+], 1992	154253970	conjugal transfer coupling protein TraG	TraG
12	Plav_3540	3785052..3785501 [+], 450	154253971	hypothetical protein
13	Plav_3541	3785670..3786653 [+], 984	154253972	P-type conjugative transfer ATPase TrbB	TrbB
14	Plav_3542	3786650..3786982 [+], 333	154253973	conjugal transfer protein TrbC	TrbC
15	Plav_3543	3786982..3787263 [+], 282	154253974	conjugal transfer protein TrbB	TrbD
16	Plav_3544	3787278..3789728 [+], 2451	154253975	conjugal transfer ATPase TrbE	TrbE
17	Plav_3545	3789734..3790513 [+], 780	154253976	conjugal transfer protein TrbJ	TrbJ
18	Plav_3546	3790524..3790808 [+], 285	154253977	hypothetical protein
19	Plav_3547	3790812..3792173 [+], 1362	154253978	conjugal transfer protein TrbL	TrbL
20	Plav_3548	3792170..3792859 [+], 690	154253979	conjugal transfer protein TrbF	TrbF
21	Plav_3549	3792856..3793836 [+], 981	154253980	P-type conjugative transfer protein TrbG	TrbG
22	Plav_3550	3793833..3795017 [+], 1185	154253981	conjugation TrbI family protein	TrbI
23	Plav_3551	3795019..3795258 [+], 240	154253982	hypothetical protein
24	Plav_3552	3795253..3796146 [-], 894	154253983	LysR family transcriptional regulator
25	Plav_3553	3796243..3796623 [+], 381	154253984	phage transcriptional regulator AlpA
26	Plav_3554	3796620..3797117 [+], 498	154253985	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009719