The information of T4SS components from NC_011984 |
| Region 1: 142668..149219 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | Avi_9174 | 138522..139493 [+], 972 | 222083257 | hypothetical protein | | |
| 2 | Avi_9175 | 140093..140449 [+], 357 | 222083258 | hypothetical protein | | |
| 3 | Avi_9177 | 140770..140940 [+], 171 | 222083259 | hypothetical protein | | |
| 4 | Avi_9178 | 140982..141260 [-], 279 | 222083260 | HNS-type DNA binding protein | | |
| 5 | Avi_9182 | 141398..141655 [-], 258 | 222083261 | hypothetical protein | | |
| 6 | Avi_9184 | 141893..142276 [-], 384 | 222083262 | nuclease protein | | |
| 7 | Avi_9185 | 142273..142671 [-], 399 | 222083263 | hypothetical protein | | |
| 8 | Avi_9186 (traG) | 142668..144638 [-], 1971 | 222083264 | conjugal transfer coupling protein TraG | TraG | |
| 9 | Avi_9187 (traD) | 144625..144870 [-], 246 | 222083265 | conjugal transfer protein TraD | | |
| 10 | Avi_9188 (traC) | 144845..145222 [-], 378 | 222083266 | conjugal transfer protein Dtr system | | |
| 11 | Avi_9189 (traA) | 145321..148692 [+], 3372 | 222083267 | Dtr system oriT relaxase | | |
| 12 | Avi_9191 (traF) | 148689..149219 [+], 531 | 222083268 | conjugal transfer pilin processing protease TraF | TraF | |
| 13 | Avi_9192 (traB) | 149236..150447 [+], 1212 | 222083269 | conjugal transfer protein TraB | | |
| 14 | Avi_9193 (traH) | 150465..151091 [+], 627 | 222083270 | conjugal transfer protein TraH | | |
| 15 | Avi_9194 (traM) | 151405..151713 [+], 309 | 222083271 | transcriptional repressor | | |
| 16 | Avi_9195 (traR) | 151773..152477 [-], 705 | 222083272 | transcriptional regulator TraR | | |
| 17 | Avi_9196 | 152864..153658 [-], 795 | 222083273 | hypothetical protein | | |
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| Region 2: 201057..210732 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | Avi_9251 | 196892..197008 [-], 117 | 222083308 | transposase | | |
| 2 | Avi_9252 | 197317..198570 [+], 1254 | 222083309 | phosphonoacetate hydrolase | | |
| 3 | Avi_9253 | 198594..199517 [-], 924 | 222083310 | LysR family transcriptional regulator | | |
| 4 | Avi_9254 | 200194..200544 [-], 351 | 222083311 | hypothetical protein | | |
| 5 | Avi_9257 (trbI) | 201057..202370 [-], 1314 | 222083312 | conjugal transfer protein TrbI | TrbI | |
| 6 | Avi_9258 (trbH) | 202382..202858 [-], 477 | 222083313 | conjugal transfer protein TrbH | TrbH | |
| 7 | Avi_9259 (trbG) | 202858..203748 [-], 891 | 222083314 | conjugal transfer protein TrbG | TrbG | |
| 8 | Avi_9260 (trbF) | 203730..204392 [-], 663 | 222083315 | conjugal transfer protein TrbF | TrbF | |
| 9 | Avi_9261 (trbL) | 204407..205603 [-], 1197 | 222083316 | conjugal transfer protein TrbL | TrbL | |
| 10 | Avi_9262 (trbK) | 205597..205818 [-], 222 | 222083317 | entry-exclusion protein | TrbK | |
| 11 | Avi_9263 (trbJ) | 205815..206624 [-], 810 | 222083318 | conjugal transfer protein TrbJ | TrbJ | |
| 12 | Avi_9265 (trbE) | 206596..209064 [-], 2469 | 222083319 | conjugal transfer protein TrbE | TrbE | |
| 13 | Avi_9267 (trbD) | 209075..209374 [-], 300 | 222083320 | conjugal transfer protein TrbD | TrbD | |
| 14 | Avi_9268 (trbC) | 209367..209771 [-], 405 | 222083321 | conjugal transfer protein TrbC | TrbC | |
| 15 | Avi_9269 (trbB) | 209761..210732 [-], 972 | 222083322 | conjugal transfer protein TrbB | TrbB | |
| 16 | Avi_9270 (traI) | 210729..211367 [-], 639 | 222083323 | putative autoinducer synthesis protein | | |
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T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.