The information of T4SS components from NC_011991 |
| Region 1: 62749..69968 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | Avi_9577 | 58430..59485 [+], 1056 | 222109171 | hypothetical protein | | |
| 2 | Avi_9580 | 59884..60285 [+], 402 | 222109172 | hypothetical protein | | |
| 3 | Avi_9583 | 60465..60785 [-], 321 | 222109173 | hypothetical protein | | |
| 4 | Avi_9585 | 61091..61414 [+], 324 | 222109174 | hypothetical protein | | |
| 5 | Avi_9587 | 61930..62268 [-], 339 | 222109175 | hypothetical protein | | |
| 6 | Avi_9588 | 62265..62570 [-], 306 | 222109176 | hypothetical protein | | |
| 7 | Avi_9589 (traG) | 62749..64638 [-], 1890 | 222109177 | conjugal transfer coupling protein TraG | TraG | |
| 8 | Avi_9590 (traD) | 64625..64903 [-], 279 | 222109178 | conjugal transfer protein Dtr system | | |
| 9 | Avi_9593 (traC) | 64932..65156 [-], 225 | 222109179 | conjugal transfer protein Dtr system | | |
| 10 | Avi_9595 (traA) | 65368..69438 [+], 4071 | 222109180 | Ti-type conjugative transfer relaxase TraA | | |
| 11 | Avi_9596 (traF) | 69435..69968 [+], 534 | 222109181 | conjugal transfer pilin processing protease TraF | TraF | |
| 12 | Avi_9597 (traB) | 69985..71127 [+], 1143 | 222109182 | conjugal transfer protein TraB | | |
| 13 | Avi_9599 (traH) | 71566..72201 [+], 636 | 222109183 | conjugal transfer protein TraH | TrbN | |
| 14 | Avi_9601 | 72574..73140 [-], 567 | 222109184 | hypothetical protein | | |
| 15 | Avi_9603 | 73516..73695 [-], 180 | 222109185 | hypothetical protein | | |
| 16 | Avi_9605 | 73734..74039 [+], 306 | 222109186 | hypothetical protein | | |
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| Region 2: 118069..127646 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | Avi_9644 | 115923..116480 [+], 558 | 222109210 | Phosphopantetheinyl transferase | | |
| 2 | Avi_9645 | 116565..117056 [+], 492 | 222109211 | hypothetical protein | | |
| 3 | Avi_9646 | 117454..118068 [-], 615 | 222109212 | hypothetical protein | | |
| 4 | Avi_9647 (trbI) | 118069..119406 [-], 1338 | 222109213 | conjugal transfer protein TrbI | TrbI | |
| 5 | Avi_9648 (trbH) | 119420..119875 [-], 456 | 222109214 | conjugal transfer protein TrbH | TrbH | |
| 6 | Avi_9650 (trbG) | 119879..120700 [-], 822 | 222109215 | conjugal transfer protein TrbG | TrbG | |
| 7 | Avi_9651 (trbF) | 120719..121384 [-], 666 | 222109216 | conjugal transfer protein TrbF | TrbF | |
| 8 | Avi_9653 (trbL) | 121425..122531 [-], 1107 | 222109217 | conjugal transfer protein TrbL | TrbL | |
| 9 | Avi_9655 (trbJ) | 122804..123592 [-], 789 | 222109218 | conjugal transfer protein TrbJ | TrbJ | |
| 10 | Avi_9656 (trbE) | 123567..125630 [-], 2064 | 222109219 | conjugal transfer protein TrbE | TrbE | |
| 11 | Avi_9658 (trbD) | 126009..126308 [-], 300 | 222109220 | conjugal transfer protein TrbD | TrbD | |
| 12 | Avi_9659 (trbC) | 126301..126666 [-], 366 | 222109221 | conjugal transfer protein | TrbC | |
| 13 | Avi_9661 (trbB) | 126684..127646 [-], 963 | 222109222 | conjugal transfer protein TrbB | TrbB | |
| 14 | Avi_9665 | 128401..129123 [+], 723 | 222109223 | two-component transcriptional regulator LuxR family | | |
| 15 | Avi_9666 | 129203..129871 [+], 669 | 222109224 | autoinducer (acylhomoserine lactone) synthase | | |
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T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.