T4SS ID320
StrainAgrobacterium vitis S4
Repliconplasmid pAtS4b [Browse all T4SS(s) in this replicon]
Location62749..69968; 118069..127646
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components

The information of T4SS components from NC_011991
Region 1: 62749..69968
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Avi_957758430..59485 [+], 1056222109171hypothetical protein 
2Avi_958059884..60285 [+], 402222109172hypothetical protein 
3Avi_958360465..60785 [-], 321222109173hypothetical protein 
4Avi_958561091..61414 [+], 324222109174hypothetical protein 
5Avi_958761930..62268 [-], 339222109175hypothetical protein 
6Avi_958862265..62570 [-], 306222109176hypothetical protein 
7Avi_9589 (traG)62749..64638 [-], 1890222109177conjugal transfer coupling protein TraG  TraG
8Avi_9590 (traD)64625..64903 [-], 279222109178conjugal transfer protein Dtr system 
9Avi_9593 (traC)64932..65156 [-], 225222109179conjugal transfer protein Dtr system 
10Avi_9595 (traA)65368..69438 [+], 4071222109180Ti-type conjugative transfer relaxase TraA 
11Avi_9596 (traF)69435..69968 [+], 534222109181conjugal transfer pilin processing protease TraF  TraF
12Avi_9597 (traB)69985..71127 [+], 1143222109182conjugal transfer protein TraB 
13Avi_9599 (traH)71566..72201 [+], 636222109183conjugal transfer protein TraH  TrbN
14Avi_960172574..73140 [-], 567222109184hypothetical protein 
15Avi_960373516..73695 [-], 180222109185hypothetical protein 
16Avi_960573734..74039 [+], 306222109186hypothetical protein 
Region 2: 118069..127646
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Avi_9644115923..116480 [+], 558222109210Phosphopantetheinyl transferase 
2Avi_9645116565..117056 [+], 492222109211hypothetical protein 
3Avi_9646117454..118068 [-], 615222109212hypothetical protein 
4Avi_9647 (trbI)118069..119406 [-], 1338222109213conjugal transfer protein TrbI  TrbI
5Avi_9648 (trbH)119420..119875 [-], 456222109214conjugal transfer protein TrbH  TrbH
6Avi_9650 (trbG)119879..120700 [-], 822222109215conjugal transfer protein TrbG  TrbG
7Avi_9651 (trbF)120719..121384 [-], 666222109216conjugal transfer protein TrbF  TrbF
8Avi_9653 (trbL)121425..122531 [-], 1107222109217conjugal transfer protein TrbL  TrbL
9Avi_9655 (trbJ)122804..123592 [-], 789222109218conjugal transfer protein TrbJ  TrbJ
10Avi_9656 (trbE)123567..125630 [-], 2064222109219conjugal transfer protein TrbE  TrbE
11Avi_9658 (trbD)126009..126308 [-], 300222109220conjugal transfer protein TrbD  TrbD
12Avi_9659 (trbC)126301..126666 [-], 366222109221conjugal transfer protein  TrbC
13Avi_9661 (trbB)126684..127646 [-], 963222109222conjugal transfer protein TrbB  TrbB
14Avi_9665128401..129123 [+], 723222109223two-component transcriptional regulator LuxR family 
15Avi_9666129203..129871 [+], 669222109224autoinducer (acylhomoserine lactone) synthase 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_011991