SecReT4

T4SS
References

T4SS ID	305
Strain	Paracoccus denitrificans PD1222
Replicon	chromosome 2 [Browse all T4SS(s) in this replicon]
Accession	NC_008687
Location	350279..368594
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	1	1

The information of T4SS components from NC_008687

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Pden_3176	345773..346171 [-], 399	119385898	hypothetical protein
2	Pden_3177	346168..346452 [-], 285	119385899	AbrB family transcriptional regulator
3	Pden_3178	346610..346891 [+], 282	119385900	transcriptional regulator
4	Pden_3179	346902..348014 [+], 1113	119385901	replication protein A
5	Pden_3180	348011..348313 [+], 303	119385902	hypothetical protein
6	Pden_3181	348310..348798 [+], 489	119385903	hypothetical protein
7	Pden_3182	348795..350282 [+], 1488	119385904	C-5 cytosine-specific DNA methylase
8	Pden_3183	350279..350881 [+], 603	119385905	conjugal transfer protein precursor	TraF
9	Pden_3184	350878..351216 [+], 339	119385906	hypothetical protein
10	Pden_3185	351220..352026 [+], 807	119385907	lytic transglycosylase, catalytic	TrbN
11	Pden_3186	352076..352657 [+], 582	119385908	hypothetical protein
12	Pden_3187	352908..354701 [+], 1794	119385909	hypothetical protein
13	Pden_3188	354719..356728 [+], 2010	119385910	conjugal transfer coupling protein TraG	TraG
14	Pden_3189	356759..357280 [+], 522	119385911	hypothetical protein
15	Pden_3190	357306..357827 [-], 522	119385912	hypothetical protein
16	Pden_3191	357824..358063 [-], 240	119385913	hypothetical protein
17	Pden_3192	358045..358470 [-], 426	119385914	twitching motility protein PilT
18	Pden_3193	358467..358730 [-], 264	119385915	plasmid stabilization protein
19	Pden_3194	359010..360014 [+], 1005	119385916	type II secretion system protein E	TrbB
20	Pden_3195	360011..360343 [+], 333	119385917	conjugal transfer protein TrbC	TrbC
21	Pden_3196	360343..360624 [+], 282	119385918	conjugal transfer protein TrbB	TrbD
22	Pden_3197	360637..363270 [+], 2634	119385919	conjugal transfer ATPase TrbE	TrbE
23	Pden_3198	363267..364064 [+], 798	119385920	conjugal transfer protein TrbJ	TrbJ
24	Pden_3199	364085..364372 [+], 288	119385921	hypothetical protein
25	Pden_3200	364380..365702 [+], 1323	119385922	conjugal transfer protein TrbL	TrbL
26	Pden_3201	365699..366388 [+], 690	119385923	conjugal transfer protein TrbF	TrbF
27	Pden_3202	366385..367428 [+], 1044	119385924	conjugal transfer protein TrbG/VirB9/CagX	TrbG
28	Pden_3203	367428..368594 [+], 1167	119385925	conjugation TrbI family protein	TrbI
29	Pden_3204	368591..368845 [+], 255	119385926	hypothetical protein
30	Pden_3205	368847..369791 [-], 945	119385927	LysR family transcriptional regulator
31	Pden_3206	369824..370534 [-], 711	119385928	regulatory protein GntR
32	Pden_3207	370806..372089 [-], 1284	119385929	TRAP dicarboxylate transporter, DctM subunit
33	Pden_3208	372102..372653 [-], 552	119385930	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008687