SecReT4

T4SS
References

T4SS ID	281
Strain	Gluconacetobacter diazotrophicus PAl 5
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_010125
Location	2990338..3003316
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	0	1

The information of T4SS components from NC_010125

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	GDI_2900	2986285..2986482 [-], 198	162148673	hypothetical protein
2	GDI_2901	2986506..2986982 [-], 477	162148674	hypothetical protein
3	GDI_2902	2986990..2987583 [-], 594	162148675	hypothetical protein
4	GDI_2904	2988359..2989351 [-], 993	162148676	integrase
5	GDI_2905	2990082..2990345 [-], 264	162148677	hypothetical protein
6	GDI_2906 (trbI)	2990338..2991474 [-], 1137	162148678	conjugal transfer protein trbI	TrbI
7	GDI_2907 (cagX)	2991582..2992589 [-], 1008	162148679	conjugal transfer protein	TrbG
8	GDI_2908 (trbF)	2992586..2993278 [-], 693	162148680	conjugal transfer protein TrbF	TrbF
9	GDI_2909 (trbL)	2993275..2994741 [-], 1467	162148681	conjugal transfer protein TrbL	TrbL
10	GDI_2910 (trbJ)	2994745..2995455 [-], 711	162148682	conjugal transfer protein TrbJ	TrbJ
11	GDI_2911 (trbE)	2995542..2997977 [-], 2436	162148683	conjugal transfer ATPase TrbE	TrbE
12	GDI_2912 (trbD)	2997991..2998266 [-], 276	162148684	conjugal transfer protein trbD	TrbD
13	GDI_2913 (trbC)	2998266..2998622 [-], 357	162148685	conjugal transfer protein trbC	TrbC
14	GDI_2914 (trbB)	2998619..2999674 [-], 1056	162148686	conjugal transfer protein trbB	TrbB
15	GDI_2915	3000038..3000814 [+], 777	162148687	mucR family transcriptional regulatory protein
16	GDI_2916	3000849..3001298 [-], 450	162148688	hypothetical protein
17	GDI_2917 (traG)	3001295..3003316 [-], 2022	162148689	conjugal transfer coupling protein TraG	TraG
18	GDI_2918 (tetR)	3003488..3004108 [-], 621	162148690	transcription regulator tetR
19	GDI_2919	3004324..3005157 [-], 834	162148691	hypothetical protein
20	GDI_2920	3005179..3005457 [+], 279	162148692	hypothetical protein
21	GDI_2921	3005649..3006095 [+], 447	162148693	hypothetical protein
22	GDI_2922	3006108..3007769 [+], 1662	162148694	DNA recombinase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Bertalan M; Albano R; de Padua V; Rouws L; Rojas C; Hemerly A; Teixeira K; Schwab S; Araujo J; Oliveira A; Franca L; Magalhaes V; Alqueres S; Cardoso A; Almeida W; Loureiro MM; Nogueira E; Cidade D; Oliveira D; Simao T; Macedo J; Valadao A; Dreschsel M; Freitas F; Vidal M; Guedes H; Rodrigues E; Meneses C; Brioso P; Pozzer L; Figueiredo D; Montano H; Junior J; de Souza Filho G; Martin Quintana Flores V; Ferreira B; Branco A; Gonzalez P; Guillobel H; Lemos M; Seibel L; Macedo J; Alves-Ferreira M; Sachetto-Martins G; Coelho A; Santos E; Amaral G; Neves A; Pacheco AB; Carvalho D; Lery L; Bisch P; Rossle SC; Urmenyi T; Rael Pereira A; Silva R; Rondinelli E; von Kruger W; Martins O; Baldani JI; Ferreira PC (2009). Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 0.729166667. [PudMed:19775431]