SecReT4

T4SS
References

T4SS ID	280
Strain	Gluconacetobacter diazotrophicus PAl 5
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_010125
Location	2829722..2843640
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	0	0	0	1

The information of T4SS components from NC_010125

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	GDI_2731	2825344..2826921 [+], 1578	162148509	hypothetical protein
2	GDI_2732 (mhpD)	2826918..2827715 [+], 798	162148510	2-keto-4-pentenoate hydratase
3	GDI_2733	2827700..2828578 [+], 879	162148511	transcriptional regulator
4	GDI_2734	2828575..2829489 [+], 915	162148512	LysR family transcriptional regulator
5	GDI_2735	2829492..2829725 [-], 234	162148513	transposase
6	GDI_2736 (trbI)	2829722..2830894 [-], 1173	162148514	conjugation TrbI-like protein	TrbI
7	GDI_2737	2830891..2831892 [-], 1002	162148515	type IV secretion system	TrbG
8	GDI_2738 (trbF)	2831889..2832575 [-], 687	162148516	conjugal transfer protein TrbF	TrbF
9	GDI_2739	2832907..2833335 [+], 429	162148517	trabsposase
10	GDI_2741 (trbJ)	2834026..2834760 [-], 735	162148518	conjugal transfer protein TrbJ	TrbJ
11	GDI_2742 (trbE)	2834802..2837234 [-], 2433	162148519	conjugal transfer ATPase TrbE	TrbE
12	GDI_2743 (trbD)	2837247..2837525 [-], 279	162148520	conjugal transfer protein trbD	TrbD
13	GDI_2744 (trbC)	2837525..2837857 [-], 333	162148521	conjugal transfer protein trbC	TrbC
14	GDI_2745	2837854..2838783 [-], 930	162148522	type II/IV secretion system protein	TrbB
15	GDI_2746	2839014..2839934 [-], 921	162148523	AraC family transcriptional regulator
16	GDI_2747	2839937..2841169 [+], 1233	162148524	aldo/keto reductase
17	GDI_2748	2841204..2841635 [-], 432	162148525	hypothetical protein
18	GDI_2749 (traG)	2841640..2843640 [-], 2001	162148526	conjugal transfer coupling protein TraG	TraG
19	GDI_2750	2843858..2844469 [-], 612	162148527	hypothetical protein
20	GDI_2751	2844471..2845097 [+], 627	162148528	hypothetical protein
21	GDI_2752	2845145..2845555 [+], 411	162148529	hypothetical protein
22	GDI_2753	2845593..2847332 [-], 1740	162148530	hypothetical protein
23	GDI_2755	2848245..2848622 [+], 378	162148531	transposase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Bertalan M; Albano R; de Padua V; Rouws L; Rojas C; Hemerly A; Teixeira K; Schwab S; Araujo J; Oliveira A; Franca L; Magalhaes V; Alqueres S; Cardoso A; Almeida W; Loureiro MM; Nogueira E; Cidade D; Oliveira D; Simao T; Macedo J; Valadao A; Dreschsel M; Freitas F; Vidal M; Guedes H; Rodrigues E; Meneses C; Brioso P; Pozzer L; Figueiredo D; Montano H; Junior J; de Souza Filho G; Martin Quintana Flores V; Ferreira B; Branco A; Gonzalez P; Guillobel H; Lemos M; Seibel L; Macedo J; Alves-Ferreira M; Sachetto-Martins G; Coelho A; Santos E; Amaral G; Neves A; Pacheco AB; Carvalho D; Lery L; Bisch P; Rossle SC; Urmenyi T; Rael Pereira A; Silva R; Rondinelli E; von Kruger W; Martins O; Baldani JI; Ferreira PC (2009). Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 0.729166667. [PudMed:19775431]