SecReT4

T4SS
References

T4SS ID	279
Strain	Gluconacetobacter diazotrophicus PAl 5
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_010125
Location	1025592..1039316
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	0	1

The information of T4SS components from NC_010125

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	GDI_1006	1021071..1021862 [+], 792	162146824	NAD(P)H oxidoreductase
2	GDI_1007	1021979..1022740 [+], 762	162146825	LysR family transcriptional regulator
3	GDI_1008	1022770..1023795 [-], 1026	162146826	integrase
4	GDI_1009 (apbA)	1024290..1025183 [+], 894	162146827	2-dehydropantoate 2-reductase
5	GDI_1010	1025350..1025595 [-], 246	162146828	hypothetical protein
6	GDI_1011 (trbI)	1025592..1026752 [-], 1161	162146829	conjugation TrbI-like protein	TrbI
7	GDI_1012 (trbG)	1026749..1027735 [-], 987	162146830	conjugal transfer protein trbG	TrbG
8	GDI_1013 (trbF)	1027735..1028415 [-], 681	162146831	conjugal transfer protein TrbF	TrbF
9	GDI_1014 (trbL)	1028418..1029677 [-], 1260	162146832	conjugal transfer protein TrbL	TrbL
10	GDI_1015 (trbJ)	1029954..1030700 [-], 747	162146833	conjugal transfer protein TrbJ	TrbJ
11	GDI_1016 (trbE)	1030697..1033123 [-], 2427	162146834	conjugal transfer ATPase TrbE	TrbE
12	GDI_1017 (trbD)	1033131..1033397 [-], 267	162146835	conjugal transfer protein; TrbD	TrbD
13	GDI_1018 (trbC)	1033397..1033714 [-], 318	162146836	conjugal transfer protein TrbC	TrbC
14	GDI_1019 (trbB)	1033720..1034688 [-], 969	162146837	type II/IV secretion system protein trbB	TrbB
15	GDI_1020	1034903..1035172 [+], 270	162146838	DNA-binding protein HU-beta
16	GDI_1021	1035329..1036783 [+], 1455	162146839	hypothetical protein
17	GDI_1022	1036903..1037328 [-], 426	162146840	hypothetical protein
18	GDI_1023 (traG)	1037334..1039316 [-], 1983	162146841	conjugal transfer coupling protein TraG	TraG
19	GDI_1024	1039474..1039764 [-], 291	162146842	hypothetical protein
20	GDI_1025	1039757..1040029 [-], 273	162146843	hypothetical protein
21	GDI_1026	1040085..1040357 [-], 273	162146844	transcriptional regulator protein
22	GDI_1027	1040448..1042202 [-], 1755	162146845	hypothetical protein
23	GDI_1028	1042476..1042922 [+], 447	162146846	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Bertalan M; Albano R; de Padua V; Rouws L; Rojas C; Hemerly A; Teixeira K; Schwab S; Araujo J; Oliveira A; Franca L; Magalhaes V; Alqueres S; Cardoso A; Almeida W; Loureiro MM; Nogueira E; Cidade D; Oliveira D; Simao T; Macedo J; Valadao A; Dreschsel M; Freitas F; Vidal M; Guedes H; Rodrigues E; Meneses C; Brioso P; Pozzer L; Figueiredo D; Montano H; Junior J; de Souza Filho G; Martin Quintana Flores V; Ferreira B; Branco A; Gonzalez P; Guillobel H; Lemos M; Seibel L; Macedo J; Alves-Ferreira M; Sachetto-Martins G; Coelho A; Santos E; Amaral G; Neves A; Pacheco AB; Carvalho D; Lery L; Bisch P; Rossle SC; Urmenyi T; Rael Pereira A; Silva R; Rondinelli E; von Kruger W; Martins O; Baldani JI; Ferreira PC (2009). Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 0.729166667. [PudMed:19775431]