 T4SS ID | 278 |
| Strain | Gluconacetobacter diazotrophicus PAl 5 |
| Replicon | chromosome [Browse all T4SS(s) in this replicon] |
| Accession | NC_010125 |
| Location | 136645..148414 |
| Name | Trb |
| Function | NA |
| Classification | Type IVA; Type P |
 This T4SS has been mentioned in a genome sequencing report. | |
T4SS components |
| Component | TrbB | TrbC | TrbD | TrbE | TrbF | TrbG | TrbH | TrbI | TrbJ |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 |
| Component | TrbK | TrbL | TrbN | TraF | TraG | ||||
| Number | 0 | 1 | 0 | 0 | 1 |
The information of T4SS components from NC_010125 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | GDI_0125 | 133335..134486 [-], 1152 | 162145959 | hypothetical protein | ||
| 2 | GDI_0126 | 134663..135796 [+], 1134 | 162145960 | hypothetical protein | ||
| 3 | GDI_0127 | 136272..136562 [-], 291 | 162145961 | hypothetical protein | ||
| 4 | GDI_0128 (traG) | 136645..138714 [+], 2070 | 162145962 | conjugal transfer coupling protein TraG | TraG | |
| 5 | GDI_0129 | 138722..139153 [+], 432 | 162145963 | hypothetical protein | ||
| 6 | GDI_0130 (trbB) | 139301..140305 [+], 1005 | 162145964 | type IV secretion system protein | TrbB | |
| 7 | GDI_0131 (trbC) | 140302..140670 [+], 369 | 162145965 | conjugal transfer protein trbC | TrbC | |
| 8 | GDI_0132 (trbD) | 140670..140945 [+], 276 | 162145966 | conjugal transfer protein trbD | TrbD | |
| 9 | GDI_0133 (trbE) | 140959..143400 [+], 2442 | 162145967 | conjugal transfer ATPase TrbE | TrbE | |
| 10 | GDI_0134 (trbJ) | 143397..144134 [+], 738 | 162145968 | conjugal transfer protein TrbJ | TrbJ | |
| 11 | GDI_0135 (trbL) | 144140..145561 [+], 1422 | 162145969 | conjugal transfer protein TrbL | TrbL | |
| 12 | GDI_0136 (trbF) | 145561..146244 [+], 684 | 162145970 | conjugal transfer protein TrbF | TrbF | |
| 13 | GDI_0137 (trbG) | 146241..147242 [+], 1002 | 162145971 | type IV secretion system protein | TrbG | |
| 14 | GDI_0138 (trbI) | 147239..148414 [+], 1176 | 162145972 | type IV secretion system protein | TrbI | |
| 15 | GDI_0139 | 148647..149372 [-], 726 | 162145973 | LysR family transcriptional regulator | ||
| 16 | GDI_0140 | 149527..149793 [+], 267 | 162145974 | transposase | ||
| 17 | GDI_0141 | 149817..150644 [+], 828 | 162145975 | transposase | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
| (1) Bertalan M; Albano R; de Padua V; Rouws L; Rojas C; Hemerly A; Teixeira K; Schwab S; Araujo J; Oliveira A; Franca L; Magalhaes V; Alqueres S; Cardoso A; Almeida W; Loureiro MM; Nogueira E; Cidade D; Oliveira D; Simao T; Macedo J; Valadao A; Dreschsel M; Freitas F; Vidal M; Guedes H; Rodrigues E; Meneses C; Brioso P; Pozzer L; Figueiredo D; Montano H; Junior J; de Souza Filho G; Martin Quintana Flores V; Ferreira B; Branco A; Gonzalez P; Guillobel H; Lemos M; Seibel L; Macedo J; Alves-Ferreira M; Sachetto-Martins G; Coelho A; Santos E; Amaral G; Neves A; Pacheco AB; Carvalho D; Lery L; Bisch P; Rossle SC; Urmenyi T; Rael Pereira A; Silva R; Rondinelli E; von Kruger W; Martins O; Baldani JI; Ferreira PC (2009). Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5. BMC Genomics. 0.729166667. [PudMed:19775431] |