SecReT4

T4SS
References

T4SS ID	260
Strain	Gluconacetobacter diazotrophicus PAl 5
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_011365
Location	3067351..3068988; 3083429..3098658
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	1	1

The information of T4SS components from NC_011365
Region 1: 3067351..3068988

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Gdia_2793	3062716..3062946 [-], 231	209544911	XRE family transcriptional regulator
2	Gdia_2794	3063159..3063422 [+], 264	209544912	hypothetical protein
3	Gdia_2795	3063576..3063791 [+], 216	209544913	hypothetical protein
4	Gdia_2796	3063751..3064362 [+], 612	209544914	hypothetical protein
5	Gdia_2797	3064575..3064826 [+], 252	209544915	hypothetical protein
6	Gdia_2798	3064838..3065953 [+], 1116	209544916	replication protein A
7	Gdia_2799	3065950..3066588 [+], 639	209544917	Cobyrinic acid ac-diamide synthase
8	Gdia_2800	3066585..3066839 [+], 255	209544918	hypothetical protein
9	Gdia_2801	3066836..3067354 [+], 519	209544919	hypothetical protein
10	Gdia_2802	3067351..3067896 [+], 546	209544920	conjugal transfer protein	TraF
11	Gdia_2803	3067932..3068267 [+], 336	209544921	hypothetical protein
12	Gdia_2804	3068272..3068988 [+], 717	209544922	lytic transglycosylase	TrbN
13	Gdia_2805	3069291..3070379 [+], 1089	209544923	transposase IS110 family protein
14	Gdia_2806	3070941..3072680 [+], 1740	209544924	hypothetical protein
15	Gdia_2807	3072840..3073616 [-], 777	209544925	XRE family transcriptional regulator

Region 2: 3083429..3098658

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Gdia_2812	3078852..3079601 [-], 750	209544930	short-chain dehydrogenase/reductase SDR
2	Gdia_2813	3079700..3080605 [+], 906	209544931	AraC family transcriptional regulator
3	Gdia_2814	3080602..3081810 [-], 1209	209544932	major facilitator superfamily protein
4	Gdia_2815	3081807..3082136 [-], 330	209544933	hypothetical protein
5	Gdia_2816	3082138..3082701 [-], 564	209544934	isochorismatase hydrolase
6	Gdia_2817	3082758..3083210 [-], 453	209544935	MarR family transcriptional regulator
7	Gdia_2818	3083429..3085411 [+], 1983	209544936	conjugal transfer coupling protein TraG	TraG
8	Gdia_2819	3085425..3085856 [+], 432	209544937	hypothetical protein
9	Gdia_2820	3085923..3086792 [-], 870	209544938	Beta-lactamase
10	Gdia_2821	3086831..3087727 [-], 897	209544939	alpha/beta hydrolase fold protein
11	Gdia_2822	3087747..3088187 [-], 441	209544940	hypothetical protein
12	Gdia_2823	3088184..3088855 [-], 672	209544941	hypothetical protein
13	Gdia_2824	3089215..3090204 [+], 990	209544942	P-type conjugative transfer ATPase TrbB	TrbB
14	Gdia_2825	3090201..3090542 [+], 342	209544943	conjugal transfer protein Trbc	TrbC
15	Gdia_2826	3090542..3090817 [+], 276	209544944	type IV secretory pathway VirB3 family protein	TrbD
16	Gdia_2827	3090825..3093263 [+], 2439	209544945	conjugal transfer ATPase TrbE	TrbE
17	Gdia_2828	3093260..3093997 [+], 738	209544946	conjugal transfer protein TrbJ	TrbJ
18	Gdia_2829	3094007..3094336 [+], 330	209544947	hypothetical protein
19	Gdia_2830	3094333..3095697 [+], 1365	209544948	conjugal transfer protein TrbL	TrbL
20	Gdia_2831	3095700..3096389 [+], 690	209544949	conjugal transfer protein TrbF	TrbF
21	Gdia_2832	3096386..3097459 [+], 1074	209544950	P-type conjugative transfer protein TrbG	TrbG
22	Gdia_2833	3097456..3098658 [+], 1203	209544951	conjugation TrbI family protein	TrbI
23	Gdia_2834	3098655..3098888 [+], 234	209544952	hypothetical protein
24	Gdia_2836	3099192..3100137 [+], 946	209544953	transposase IS630
25	Gdia_2837	3100959..3102095 [-], 1137	209544954	monooxygenase FAD-binding
26	Gdia_2838	3102092..3103291 [-], 1200	209544955	G-D-S-L family lipolytic protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_011365