T4SS ID256
StrainAgrobacterium tumefaciens plasmid Ti (NC_002377)
Repliconplasmid Ti [Browse all T4SS(s) in this replicon]
Location28152..34660; 96666..106317
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components

The information of T4SS components from NC_002377
Region 1: 28152..34660
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pTi_014 (apeA)23691..25094 [-], 140410955030hypothetical protein 
2pTi_015 (ycf)25170..26018 [-], 84910955031hypothetical protein 
3pTi_016 (ycg)26188..26685 [-], 49810955032hypothetical protein 
4pTi_017 (hupT)26747..27025 [-], 27910955033hypothetical protein 
5pTi_018 (ych)27163..27420 [-], 25810955034hypothetical protein 
6pTi_019 (yci)27697..28011 [-], 31510955035hypothetical protein 
7pTi_020 (traG)28152..30074 [-], 192310955036conjugal transfer coupling protein TraG  TraG
8pTi_021 (traD)30061..30306 [-], 24610955037conjugal transfer protein TraD 
9pTi_022 (traC)30281..30577 [-], 29710955038conjugal transfer protein TraC 
10pTi_023 (traA)30831..34133 [+], 330310955039Dtr system oriT relaxase 
11pTi_024 (traF)34130..34660 [+], 53110955040conjugal transfer pilin processing protease TraF  TraF
12pTi_025 (traB)34650..35876 [+], 122710955041conjugal transfer protein TraB 
13pTi_026 (traH)35893..36522 [+], 63010955042conjugal transfer protein TraH 
14pTi_027 (ydh)37045..37329 [+], 28510955043hypothetical protein 
15pTi_028 (traM)37666..37974 [+], 30910955044hypothetical protein 
16pTi_029 (traR)38453..39157 [-], 70510955045transcriptional regulator TraR 
Region 2: 96666..106317
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pTi_075 (moaC)92102..92983 [+], 88210955091hypothetical protein 
2pTi_076 (moaD)92983..94749 [+], 176710955092hypothetical protein 
3pTi_077 (moaA)94865..96433 [+], 156910955093hypothetical protein 
4pTi_078 (trbI)96666..97967 [-], 130210955094conjugal transfer protein TrbI  TrbI
5pTi_079 (trbH)97977..98456 [-], 48010955095conjugal transfer protein TrbH  TrbH
6pTi_080 (trbG)98453..99307 [-], 85510955096conjugal transfer protein TrbG  TrbG
7pTi_081 (trbF)99324..99986 [-], 66310955097conjugal transfer protein TrbF  TrbF
8pTi_082 (trbL)100001..101188 [-], 118810955098conjugal transfer protein TrbL  TrbL
9pTi_083 (trbK)101182..101409 [-], 22810955099hypothetical protein 
10pTi_084 (trbJ)101406..102215 [-], 81010955100conjugal transfer protein TrbJ  TrbJ
11pTi_085 (trbE)102187..104649 [-], 246310955101conjugal transfer protein TrbE  TrbE
12pTi_086 (trbD)104660..104959 [-], 30010955102conjugal transfer protein TrbD  TrbD
13pTi_087 (trbC)104952..105356 [-], 40510955103conjugal transfer protein TrbC  TrbC
14pTi_088 (trbB)105346..106317 [-], 97210955104conjugal transfer protein TrbB  TrbB
15pTi_089 (traI)106314..106952 [-], 63910955105putative autoinducer synthesis protein 
16pTi_090 (repA)107313..108530 [+], 121810955106plasmid-partitioning protein RepA 
17pTi_091 (repB)108727..109770 [+], 104410955107plasmid partitioning protein RepB 
18pTi_092 (repC)109976..111295 [+], 132010955108replication initiation protein RepC 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_002377