SecReT4

T4SS
References

T4SS ID	236
Strain	Nitrosomonas eutropha C91
Replicon	plasmid Plasmid1 [Browse all T4SS(s) in this replicon]
Accession	NC_008341
Location	6945..28627; 52240..55551
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	2	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	1	1

The information of T4SS components from NC_008341
Region 1: 6945..28627

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Neut_2534	3243..3731 [-], 489	114326557	deoxyribonuclease I
2	Neut_2535	3789..4745 [-], 957	114326558	hypothetical protein
3	Neut_2536	4732..5544 [-], 813	114326559	hypothetical protein
4	Neut_2538	5945..6559 [+], 615	114326560	resolvase domain-containing protein
5	Neut_2539	6945..8207 [-], 1263	114326561	conjugation TrbI family protein	TrbI
6	Neut_2540	8303..8761 [-], 459	114326562	conjugal transfer TrbH family protein	TrbH
7	Neut_2541	8758..9339 [-], 582	114326563	conjugal transfer protein TrbG/VirB9/CagX	TrbG
8	Neut_2542	9523..10083 [+], 561	114326564	resolvase domain-containing protein
9	Neut_2543	10067..11722 [+], 1656	114326565	integrase catalytic subunit
10	Neut_2544	11712..12680 [+], 969	114326566	AAA ATPase
11	Neut_2545	12800..15715 [+], 2916	114326567	UvrD/REP helicase
12	Neut_2546	15715..17703 [+], 1989	114326568	DNA methylase N-4/N-6 domain-containing protein
13	Neut_2547	17693..20386 [+], 2694	114326569	hypothetical protein
14	Neut_2548	20607..21059 [-], 453	114326570	mating pair formation protein TrbG	TrbG
15	Neut_2549	21073..21765 [-], 693	114326571	conjugal transfer protein	TrbF
16	Neut_2550	21880..23334 [-], 1455	114326572	trbL protein	TrbL
17	Neut_2551	23637..24386 [-], 750	114326573	TrbJ protein	TrbJ
18	Neut_2552	24364..26862 [-], 2499	114326574	CagE, TrbE, VirB component of type IV transporter system	TrbE
19	Neut_2553	26877..27194 [-], 318	114326575	conjugal transfer protein TrbD	TrbD
20	Neut_2554	27197..27652 [-], 456	114326576	conjugal transfer protein TrbC	TrbC
21	Neut_2555	27662..28627 [-], 966	114326577	type II secretion system protein E	TrbB
22	Neut_2556	28725..28982 [-], 258	114326578	XRE family transcriptional regulator
23	Neut_2557	29038..30006 [+], 969	114326579	TrfA family protein
24	Neut_2558	30612..31382 [-], 771	114326580	hypothetical protein
25	Neut_2559	31462..31689 [+], 228	114326581	transcriptional regulator/antitoxin, MazE
26	Neut_2560	31686..32075 [+], 390	114326582	death-on-curing family protein

Region 2: 52240..55551

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Neut_2576	47973..48413 [-], 441	114326598	hypothetical protein
2	Neut_2577	48429..49139 [-], 711	114326599	transfer origin protein, TraL
3	Neut_2578	49795..50190 [+], 396	114326600	TraJ protein
4	Neut_2579	50171..52219 [+], 2049	114326601	relaxase/mobilization nuclease family protein
5	Neut_2580	52240..54159 [+], 1920	114326602	conjugal transfer coupling protein TraG	TraG
6	Neut_2581	54156..54716 [+], 561	114326603	Type IV secretory pathway protease TraF-like	TraF
7	Neut_2582	54793..55551 [+], 759	114326604	lytic transglycosylase, catalytic	TrbN
8	Neut_2583	55554..58736 [+], 3183	114326605	hypothetical protein
9	Neut_2584	58940..59557 [+], 618	114326606	cobyrinic acid a,c-diamide synthase
10	Neut_2585	59554..59832 [+], 279	114326607	hypothetical protein
11	Neut_2586	60002..60226 [-], 225	114326608	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008341