SecReT4

T4SS
References

T4SS ID	169
Strain	Escherichia coli SE11
Replicon	plasmid pSE11-1 [Browse all T4SS(s) in this replicon]
Accession	NC_011419
Location	51842..80231
Name	Tra_I
Function	conjugation
Classification	Type IVB; Type I
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraH_I	TraI_I	TraJ_I	TraK_I	TraL_I	TraM_I	TraN_I	TraO_I	TraP_I
Number	1	1	1	1	1	1	1	1	1
Component	TraQ_I	TraR_I	TraS_I	TraT_I	TraU_I	TraV_I	TraW_I	TraX_I	TraY_I
Number	1	1	1	1	1	1	1	1	1
Component	TrbA_I	TrbB_I	TrbC_I
Number	1	1	1

The information of T4SS components from NC_011419

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ECSE_P1-0071	47258..48109 [+], 852	209922023	hypothetical protein
2	ECSE_P1-0072	48195..48530 [-], 336	209922024	hypothetical protein
3	ECSE_P1-0073	48763..49095 [+], 333	209922025	relaxosome component NikA
4	ECSE_P1-0074	49106..51805 [+], 2700	209922026	relaxase NikB
5	ECSE_P1-0075	51842..54133 [-], 2292	209922027	TrbC protein	TrbC_I
6	ECSE_P1-0076	54126..55196 [-], 1071	209922028	TrbB protein	TrbB_I
7	ECSE_P1-0077	55215..56423 [-], 1209	209922029	TrbA protein	TrbA_I
8	ECSE_P1-0078	56576..56860 [+], 285	209922030	plasmid stability protein
9	ECSE_P1-0079	56939..57190 [-], 252	209922031	hypothetical protein
10	ECSE_P1-0080	57656..57781 [+], 126	209922032	hypothetical protein
11	ECSE_P1-0081	57846..58088 [-], 243	209922033	hypothetical protein
12	ECSE_P1-0082	58207..58416 [-], 210	209922034	putative regulator protein
13	ECSE_P1-0083	58514..59176 [-], 663	209922035	surface exclusion protein ExcA
14	ECSE_P1-0084	59247..61484 [-], 2238	209922036	TraY protein	TraY_I
15	ECSE_P1-0085	61512..62096 [-], 585	209922037	TraX protein	TraX_I
16	ECSE_P1-0086	62125..63327 [-], 1203	209922038	TraW protein	TraW_I
17	ECSE_P1-0087	63294..63908 [-], 615	209922039	TraV protein	TraV_I
18	ECSE_P1-0088	63908..66952 [-], 3045	209922040	TraU protein	TraU_I
19	ECSE_P1-0089	67042..67842 [-], 801	209922041	TraT protein	TraT_I
20	ECSE_P1-0090	67826..68014 [-], 189	209922042	TraS protein	TraS_I
21	ECSE_P1-0091	68078..68482 [-], 405	209922043	TraR protein	TraR_I
22	ECSE_P1-0092	68532..69059 [-], 528	209922044	TraQ protein	TraQ_I
23	ECSE_P1-0093	69059..69763 [-], 705	209922045	TraP protein	TraP_I
24	ECSE_P1-0094	69763..71052 [-], 1290	209922046	TraO protein	TraO_I
25	ECSE_P1-0095	71055..72038 [-], 984	209922047	TraN protein	TraN_I
26	ECSE_P1-0096	72049..72741 [-], 693	209922048	TraM protein	TraM_I
27	ECSE_P1-0097	72738..73085 [-], 348	209922049	TraL protein	TraL_I
28	ECSE_P1-0098	73103..76870 [-], 3768	209922050	DNA primase SogL
29	ECSE_P1-0099	76960..77511 [-], 552	209922051	endonuclease
30	ECSE_P1-0100	77526..77816 [-], 291	209922052	TraK protein	TraK_I
31	ECSE_P1-0101	77813..78961 [-], 1149	209922053	TraJ protein	TraJ_I
32	ECSE_P1-0102	78958..79776 [-], 819	209922054	TraI protein	TraI_I
33	ECSE_P1-0103	79773..80231 [-], 459	209922055	TraH protein	TraH_I
34	ECSE_P1-0104	80626..81210 [-], 585	209922056	TraG protein
35	ECSE_P1-0105	81270..82472 [-], 1203	209922057	TraF protein
36	ECSE_P1-0106	82709..83383 [-], 675	209922058	TraE protein
37	ECSE_P1-0107	83773..85065 [-], 1293	209922059	shufflon protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Oshima K; Toh H; Ogura Y; Sasamoto H; Morita H; Park SH; Ooka T; Iyoda S; Taylor TD; Hayashi T; Itoh K; Hattori M (2008). Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult. DNA Res. 15(6):375-86. [PudMed:18931093]