| Protein ID: 47104033 |
 T4SS name [ID] | Tra_F [542] |
| Gene symbol | - |
| Locus tag | PBPRC0008 |
| Strain | Photobacterium profundum SS9 |
| Replicon | plasmid pPBPR1 [GenBank: NC_005871] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 5259..7847 [+] |
| Product | putative sex pilus assembly and synthesis protein TraC |
| Component type | TraC_F |
| UniProt ID | Q6LW89 |
| KEGG ID | ppr:PBPRC0008 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TraC_F_IV [PF11130], Evalue: 6.2e-47, Aligned region: 19..255 AAA_10 [PF12846], Evalue: 7.3e-43, Aligned region: 454..750 |
| Protein Sequence: 862 a.a. [Download] |
| >gi|47104033|ref|YP_015462.1| putative sex pilus assembly and synthesis protein TraC [Photobacterium profundum SS9] MRNAFSDLAGFVKSSKDSNYHIHRELPYRFYDDTTGIFENHHSLGFGLSLSVLGGANDDLVSSLNAIICT LPEGDKWDYQFVLVGNNQVADLIKQNTQAMAIRGGICEQFATNQGIYAQHSAQQGFSTRLNKAYHYDLKD YNACLFVSTTDSKMALQETKDMLAAELTQCGINHTPVTPVALMTHVREHLNFNRHQDRPLPATYNEFETI NTQTLSPDSEYLLNRTYVDTRHTPLDSDDAVRTRIVNLGLARLPNDFRLYGFSNCLASLKRTANSLQCPH RISVHFRVEPSGEQITKNDSKIQSLTKIVESKMRLLVPSAEEELKERKELQHGLMHQEYKVATMVMTVSL YTTEEKARTHTTVATSTFREAGLNLVRTNMLQGQSTLSTLPFAMSEGYFEDCKKAARTRTMKTSNVVNFL PIVAEYKNFSGGVMVPTMRHQISYFDPFNCGSDNYNIAITGGSGAGKSVFTQLIAQAIHARSGKVWILDK GSSYKKLTLMLGGTYMTHESIFLNPFTHLDKIEEARDAGTFGDITDDDGNIVDPIALVLDNITGLIGSMA SPREELETYQEAMLGDAILIAWKKMGTQTRIDDVQDALYALAKEKNDDRRISDIAAQLNKYCSAGVYGDV FNKPSQLDPTIHITTLELDGFADAVKRPVIFALMVAINQQMYLSGSRSTPKMCIIEEAWSMMGGANAQAR EFINTGYRTVRKFGGSFCTVTQGIEDFFLNEEARAAFNNSDIHITLRQGEGFEKFIKENPKHFSPYEQNM IKNFPRAQDAGHSCAMIKAGSYTSFHRIFADPWSRSMLSTEPHEFEYCETLINQGTPLLDAIEKTAMHFN GEAMSEFAALLATYSARQESHP |
| Nucleotide Sequence: 2589 bp [Download] |
| >gi|47104025|ref|NC_005871.1|:5259-7847 Photobacterium profundum SS9 plasmid pPBPR1, complete sequence ATGAGAAATGCGTTCTCTGATTTGGCGGGGTTCGTCAAATCCAGTAAAGACAGCAACTATCATATTCACC GAGAGTTGCCCTACCGTTTTTATGATGACACGACAGGCATCTTCGAAAACCATCACAGCCTCGGTTTTGG TTTGTCGCTTTCGGTCCTTGGCGGGGCCAATGACGATTTGGTGTCATCATTGAACGCCATCATCTGTACC TTGCCCGAAGGGGATAAGTGGGATTATCAGTTTGTGTTGGTCGGCAATAACCAGGTGGCCGATTTGATTA AACAAAATACACAAGCCATGGCCATCCGTGGGGGGATCTGTGAGCAGTTTGCCACCAACCAGGGGATTTA TGCCCAGCACAGTGCCCAGCAGGGATTCAGTACCCGGCTTAATAAAGCCTATCACTACGATTTAAAAGAT TACAACGCCTGCTTGTTTGTCTCGACCACCGATAGCAAGATGGCTTTACAAGAAACCAAAGACATGTTGG CCGCCGAGCTGACCCAATGTGGCATCAACCATACCCCGGTCACGCCAGTGGCATTGATGACCCATGTACG TGAACACCTCAACTTCAATCGGCATCAGGACCGCCCTCTGCCTGCCACGTACAATGAATTTGAGACCATC AATACCCAAACATTGAGCCCTGACAGCGAATACCTGCTGAATCGCACCTATGTGGATACGCGTCATACCC CGTTAGACAGTGATGACGCGGTGCGTACTCGTATCGTTAACCTTGGGCTGGCTCGATTACCCAATGACTT TCGTTTATACGGGTTTTCAAACTGTTTGGCCTCACTGAAACGCACCGCCAACAGCTTGCAATGCCCCCAC CGGATCAGCGTCCATTTTCGGGTTGAGCCCTCTGGGGAGCAAATTACAAAAAATGACAGTAAAATCCAAT CCCTAACCAAGATTGTCGAATCCAAAATGCGCTTGCTGGTCCCCTCTGCCGAGGAAGAGCTCAAAGAGCG CAAAGAACTGCAACATGGGTTGATGCACCAAGAATACAAGGTGGCCACCATGGTCATGACCGTCAGTCTC TATACCACCGAAGAAAAAGCCCGGACCCATACCACGGTGGCCACCTCAACGTTTCGTGAAGCGGGGCTGA ATCTAGTACGGACCAATATGCTGCAAGGGCAAAGTACCCTGTCTACCCTGCCGTTTGCCATGAGTGAAGG GTATTTCGAGGACTGCAAGAAAGCCGCTCGCACCCGCACCATGAAAACATCCAACGTCGTCAATTTCCTG CCGATAGTCGCGGAATACAAAAACTTTTCCGGTGGGGTCATGGTGCCGACCATGCGCCATCAAATCAGCT ATTTTGATCCCTTCAACTGTGGCAGTGACAACTACAACATTGCCATTACGGGCGGGTCGGGGGCCGGAAA ATCCGTGTTCACCCAATTGATCGCCCAGGCTATCCATGCCCGGTCGGGTAAAGTGTGGATTTTGGATAAA GGATCAAGTTACAAAAAGCTCACCTTGATGCTTGGGGGTACCTACATGACCCATGAAAGTATCTTCCTCA ACCCGTTTACCCATTTGGATAAAATCGAAGAAGCCCGCGATGCGGGCACCTTCGGTGACATCACCGATGA CGATGGCAATATTGTTGATCCGATAGCCTTGGTGCTTGACAACATCACCGGGCTCATCGGCTCCATGGCA TCCCCCCGTGAAGAGCTCGAAACCTATCAGGAGGCGATGCTCGGGGACGCCATTTTAATCGCGTGGAAAA AAATGGGGACCCAAACACGCATTGATGATGTGCAAGATGCGTTATACGCGCTGGCCAAAGAAAAAAATGA TGACCGTCGTATCAGTGATATTGCGGCCCAGCTCAATAAATATTGCAGCGCAGGGGTGTACGGCGATGTA TTTAACAAACCGTCGCAATTGGATCCAACGATCCACATCACCACGTTGGAATTGGATGGGTTTGCCGATG CCGTCAAACGCCCGGTTATTTTTGCCCTTATGGTCGCGATTAACCAGCAGATGTACCTGTCCGGCAGTCG CTCCACCCCGAAGATGTGCATCATTGAAGAAGCCTGGTCAATGATGGGCGGGGCCAACGCCCAAGCCCGG GAGTTTATCAATACCGGGTATCGGACGGTACGAAAATTCGGTGGCAGTTTTTGTACCGTCACGCAGGGGA TTGAAGATTTCTTCCTCAATGAAGAAGCCCGCGCCGCCTTTAACAACTCCGATATTCACATCACCTTGCG ACAAGGTGAAGGGTTTGAAAAGTTCATCAAGGAAAACCCCAAGCACTTTAGTCCCTATGAGCAAAACATG ATCAAGAACTTCCCCCGCGCACAGGATGCAGGTCATTCTTGCGCCATGATAAAAGCAGGATCGTATACCT CTTTTCACCGTATTTTTGCCGATCCGTGGTCACGCTCCATGTTATCCACTGAGCCACATGAATTTGAATA TTGTGAAACCTTGATCAACCAAGGTACCCCGTTGCTCGATGCCATCGAAAAAACGGCCATGCACTTTAAC GGCGAGGCAATGTCTGAGTTCGCCGCACTCTTAGCGACCTATTCTGCCCGTCAGGAGAGCCACCCATGA |