| Protein ID: 337739065 |
 T4SS name [ID] | VirB [199] |
| Gene symbol | virD4 |
| Locus tag | OCA5_pOC16701110 |
| Strain | Oligotropha carboxidovorans OM5 |
| Replicon | plasmid pOC167 [GenBank: NC_015685] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 106909..109065 [-] |
| Product | type IV secretion protein VirD4 |
| Component type | VirD4 |
| UniProt ID | B6JK53 |
| KEGG ID | oca:OCAR_7705, ocg:OCA5_pOC16701110 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 2.8e-78, Aligned region: 146..553 TraG-D_C [PF12696], Evalue: 1.1e-23, Aligned region: 402..522 TrwB_AAD_bind [PF10412], Evalue: 2.6e-20, Aligned region: 149..485 |
| Protein Sequence: 718 a.a. [Download] |
| >gi|337739065|ref|YP_004634424.1| type IV secretion protein VirD4 [Oligotropha carboxidovorans OM5] MARVVAYRIGVAILLLLAFWLLWSMAYEIVVALRWAPGRFPSEGTTRWALFRMQNADRSADFFVIAWRHF YNRLLFPGTQLEALIRAGYAAATVGAIGLAGALFAVINRRQMPYGAARFGTLMEAAKQGLTAKRGIVLGT LSGATLRSDEPAHILVVGPSRSGKGTGFVLPNGYLWQGSAVFFDPKRENFEALAEHRAAMGNKVFMFSPG SNDTHRYNPLDFVRRDERMATDCLVVASFVIPEKADDTWAGAGRLLLSALIGYVLASPLIAGAQHMRTVA RMTTTGKDISSVLRAIVKTERQHLPAWVVDSFNQYIALEPETRNSAVFNVNMAMSLWNNGLISAATETSD FDIRELRRRPMTIFIGCTIAELSIFRPLIRILFQQIHDLMMVKIPGDDEPHQVLLMLDEFYHVGRMDSLI SKITISAGYGFRMAIVMQDIAQLDELYGRNTRITTVSGSQIKLFIQINDLETSDFVSEMLGETTQVYKTP IQRPGQGIFAPRVWAPHYTPRPLRSPLELREMSARLSILMVKNSRSFELTKIRHYLDKPYRAYYERAKGS SPALPKLRTWQDEALRGAINPAPDTPQEPATTASPSTAPPPPTSAPARKVTTSRRSAKSTTTKAKTSEPL REFAPLTLSSPRPTPPTPPRKALSLGATPPVPPGESCDVRDILASAAAGQDEHFTAMVSVLRSTPDTKVQ QSIEMLRSLHQIFGDDEQ |
| Nucleotide Sequence: 2157 bp [Download] |
| >gi|337738957|ref|NC_015685.1|:c109065-106909 Oligotropha carboxidovorans OM5 plasmid pOC167, complete sequence ATGGCGCGCGTCGTCGCCTATAGGATCGGCGTCGCGATCCTGCTGCTGCTCGCCTTCTGGCTGCTGTGGA GCATGGCCTATGAGATTGTCGTTGCCCTGCGCTGGGCGCCGGGCCGCTTCCCGAGTGAGGGCACCACCCG CTGGGCGCTGTTCCGGATGCAGAACGCCGATCGCTCCGCCGACTTCTTTGTGATCGCCTGGCGTCATTTC TACAACCGACTCCTGTTCCCAGGCACCCAACTCGAGGCACTGATCCGCGCCGGCTATGCGGCGGCCACTG TTGGCGCGATCGGACTCGCGGGGGCGCTGTTCGCGGTCATCAATCGCCGCCAGATGCCGTATGGCGCCGC CCGCTTCGGCACGCTGATGGAGGCGGCCAAGCAGGGCCTGACCGCCAAGCGCGGGATCGTGCTGGGAACG CTGAGCGGCGCCACGCTCCGCTCGGACGAGCCCGCACATATCCTGGTCGTCGGACCATCACGCTCCGGCA AGGGCACCGGCTTCGTCCTCCCGAATGGCTATCTTTGGCAGGGTTCGGCCGTGTTCTTCGATCCGAAGCG CGAAAACTTCGAAGCGCTTGCGGAACATCGCGCCGCGATGGGCAACAAGGTTTTTATGTTCTCGCCGGGA TCCAACGACACGCATCGATACAATCCGCTCGATTTCGTACGGCGCGACGAGCGCATGGCGACCGACTGCC TGGTCGTCGCCTCCTTTGTGATTCCTGAAAAAGCCGACGACACCTGGGCCGGAGCCGGCCGTCTTCTGCT CTCGGCGTTAATCGGCTACGTGCTGGCTTCACCGTTGATCGCGGGCGCACAGCACATGCGCACGGTGGCC CGGATGACGACGACCGGCAAGGATATCTCCTCGGTGCTGCGTGCGATCGTGAAGACTGAACGACAGCACT TGCCGGCATGGGTGGTCGACAGCTTCAACCAGTACATCGCGTTGGAGCCCGAGACCCGCAACAGCGCCGT GTTCAACGTCAATATGGCGATGTCGCTGTGGAACAACGGCCTCATCTCGGCCGCGACCGAGACATCCGAT TTCGACATTCGCGAGCTACGGCGCCGTCCGATGACGATTTTCATCGGCTGTACCATCGCCGAACTGTCGA TCTTCCGGCCGCTAATCCGCATCCTGTTTCAGCAGATCCACGATCTGATGATGGTGAAGATTCCGGGTGA CGACGAGCCGCATCAGGTGCTGCTCATGCTCGACGAATTCTACCATGTCGGCCGAATGGACTCTTTGATC TCGAAGATCACGATCAGCGCGGGATATGGCTTCCGGATGGCGATCGTGATGCAGGACATTGCGCAGCTCG ACGAACTCTACGGCAGGAACACGCGCATCACCACGGTCTCGGGCTCGCAGATCAAGCTGTTCATCCAGAT CAACGATCTCGAAACCTCGGACTTTGTGTCCGAGATGCTCGGCGAAACGACACAAGTCTATAAAACGCCG ATCCAGCGTCCAGGACAGGGCATTTTCGCGCCGCGCGTCTGGGCACCTCACTATACACCGCGCCCGCTGC GCAGCCCGCTCGAACTCCGCGAGATGTCGGCCCGGCTGTCAATCCTGATGGTCAAGAACTCCCGCTCGTT CGAATTGACCAAAATCCGGCACTACTTAGATAAACCCTATCGCGCGTATTACGAACGGGCAAAGGGCTCT TCGCCGGCGCTGCCCAAACTGCGCACCTGGCAAGATGAGGCGCTGCGCGGGGCAATCAATCCGGCGCCTG ACACGCCCCAAGAACCGGCCACGACCGCAAGCCCGTCGACAGCGCCACCGCCACCCACATCGGCGCCGGC TCGCAAGGTGACCACATCCCGTCGAAGCGCGAAAAGCACAACAACCAAAGCGAAGACCTCCGAACCGCTG CGAGAATTTGCCCCTCTCACTCTCTCTTCGCCGCGTCCAACACCGCCAACCCCGCCGCGCAAGGCGCTGT CGCTCGGCGCAACGCCTCCCGTTCCTCCGGGAGAAAGCTGCGACGTGCGGGACATTCTCGCATCTGCCGC TGCAGGACAGGACGAACATTTCACCGCAATGGTGAGTGTGTTGCGTTCAACACCAGACACGAAGGTCCAG CAAAGTATCGAGATGCTTAGGTCTTTACACCAAATCTTTGGCGACGACGAACAGTGA |