SecReT4
Protein ID: 334143082
T4SS name [ID]VirB [27]
Gene symbol-
Locus tagPP1Y_Spl367
StrainNovosphingobium sp. PP1Y
Repliconplasmid Spl [GenBank: NC_015582] [Browse all T4SS(s) in this replicon]
Location [Strand]36230..38596 [-]
Producttype IV secretion system protein VirB4
Component typeVirB4
UniProt IDF6IBW7
KEGG IDnpp:PP1Y_Spl367
PDB IDNA
Domain hit(s) vs Pfam CagE_TrbE_VirB [PF03135], Evalue: 1.7e-50, Aligned region: 179..380
AAA_10 [PF12846], Evalue: 1.5e-38, Aligned region: 433..712
TrwB_AAD_bind [PF10412], Evalue: 2.5e-05, Aligned region: 430..468
Protein Sequence: 788 a.a.     [Download]
>gi|334143082|ref|YP_004537958.1| type IV secretion system protein VirB4 [Novosphingobium sp. PP1Y]
MTRFALKHKQVALREEDDIKFIPYTRHVNDTVIALADGSLMRMYRVDGRPFETCDIADLNTWHNKLNIAW
RTIGDDRVAVWTHLVRTATNPELDGEFQSDFARDLQARYSERLKEKVLYHNEFYVTIVVRPSNMAGDQLG
RLFGKADASQAADDRALAIMADKCRDFESMLADTNPVALSLYERGGVLFSQPMEVLHFIQTGDRIRIPLV
RGRLGQAIYNSRIIFGREAAEIRLPDRSHYLGMFGVREYVANTRSGQFNSLLTLDFPYVLTQSFAPLVKS
VAAERFQKKYKQMVSSDDAGVSQAEELLDGVDDLMSNRFVMGEHHLSIAVIDDNPKRLLERLSIARAAAA
DTGMVMAREDVALEAAFWAQLPGNFRMRARPAVINSRNFAAMSPFHTFPAGRKSGNHWGEAVTLLKTRAG
SSFWFNFHRADIGHTLIIGPTGGGKTVLQNFLLAQLEKTGAKQIFFDKDRGAEIFMRACGGTYLALRNGE
PTGFAPLKGLEPTHDNMAFLRQFIRVLVRRDNRPLTVTQERTIDEGLDAVMRLPATQRSMSALREMLGYA
DAEGIGARLERWCRGGALGWAFDGPADEVSMAARFVGFDMTDFLENPEIRTPMMLYLFHRVDELLNGQRV
VVDIDEFWKALQDDAFKSFAQDGLKTFRKRNAFMVFGTQSPADALRSSIAHSIIEQTATKILLPNSDAKR
SDYCEGLGLTEAEFRLIKEDLTPESRCFLIKQGHTSIVAKLDLNGMLDELSVLSGRAETLEVMEAAIAEA
GTDPAAWLPLFYASERRS
 
Nucleotide Sequence: 2367 bp     [Download]
>gi|334143044|ref|NC_015582.1|:c38596-36230 Novosphingobium sp. PP1Y plasmid Spl, complete sequence
ATGACTAGGTTCGCCCTCAAGCACAAACAGGTCGCATTGCGCGAAGAGGATGACATCAAGTTCATCCCCT
ACACCCGGCACGTCAACGACACCGTGATTGCGCTGGCCGATGGCTCGCTCATGCGCATGTACCGGGTCGA
TGGCCGTCCGTTCGAGACCTGCGACATTGCCGACCTCAACACCTGGCACAACAAGCTCAATATCGCCTGG
CGCACGATCGGCGATGACCGGGTGGCCGTGTGGACGCACCTGGTGCGCACCGCCACCAATCCCGAACTGG
ACGGCGAGTTTCAGTCCGACTTCGCGCGCGACTTGCAGGCCAGGTACTCCGAGCGCCTCAAGGAAAAGGT
GCTCTACCACAATGAGTTCTACGTCACGATCGTGGTGCGCCCCTCGAACATGGCCGGTGACCAGCTCGGC
CGCCTGTTCGGCAAGGCCGATGCCAGCCAGGCCGCCGACGATCGCGCGCTGGCTATCATGGCCGACAAGT
GCCGCGACTTCGAGAGCATGCTGGCCGATACCAACCCGGTGGCGCTCTCGCTCTACGAGCGCGGCGGCGT
TCTGTTTTCGCAGCCCATGGAAGTGCTGCACTTCATCCAGACCGGGGACCGTATTCGCATCCCGCTCGTC
CGCGGTCGGCTCGGACAGGCGATCTACAATTCGCGGATCATCTTCGGGCGCGAGGCGGCCGAGATTCGCC
TTCCCGACAGGTCGCATTACCTGGGCATGTTCGGGGTGCGCGAGTACGTCGCGAACACGCGCAGCGGCCA
GTTCAACAGCCTTCTGACGCTCGATTTCCCCTATGTGCTGACGCAAAGCTTCGCGCCGCTGGTCAAGTCG
GTCGCGGCCGAGCGCTTCCAGAAGAAGTACAAGCAGATGGTCTCCTCGGACGATGCTGGCGTAAGCCAGG
CCGAAGAGTTGCTCGATGGCGTCGATGACCTCATGTCGAACCGCTTCGTCATGGGCGAGCATCACCTCTC
GATTGCCGTGATCGACGATAATCCCAAGCGCCTGCTCGAACGCCTCTCGATCGCCCGCGCCGCCGCAGCC
GATACCGGCATGGTCATGGCGCGCGAGGACGTCGCGCTGGAAGCCGCGTTCTGGGCGCAGCTTCCCGGCA
ACTTCAGGATGCGGGCGCGGCCCGCCGTGATCAACAGCCGCAATTTCGCGGCGATGAGCCCGTTTCATAC
CTTCCCTGCGGGTCGCAAGTCGGGGAACCACTGGGGCGAGGCGGTGACGCTCTTGAAAACGCGCGCGGGC
TCGTCCTTCTGGTTCAATTTCCACCGCGCCGACATTGGCCACACGCTCATCATCGGCCCCACCGGCGGGG
GCAAGACGGTCCTGCAGAACTTCCTGCTCGCCCAGCTCGAAAAAACCGGCGCCAAGCAGATTTTCTTCGA
CAAGGACCGGGGCGCGGAGATCTTCATGCGCGCCTGCGGCGGAACCTACCTGGCCCTGCGCAACGGCGAG
CCGACCGGCTTTGCCCCGCTCAAGGGGCTGGAGCCGACCCACGACAACATGGCGTTTCTGCGCCAGTTCA
TCCGCGTCCTGGTCCGGCGCGACAACCGGCCCCTCACCGTCACCCAGGAGCGCACCATCGACGAGGGCCT
CGATGCCGTGATGCGTCTTCCTGCCACGCAACGCTCGATGAGCGCGCTTCGCGAAATGCTCGGCTATGCC
GATGCCGAAGGCATTGGCGCTCGCCTCGAGCGCTGGTGCCGGGGCGGCGCGCTCGGATGGGCTTTCGATG
GCCCGGCCGATGAGGTCTCGATGGCGGCCCGCTTCGTCGGTTTCGACATGACGGACTTTCTCGAAAATCC
CGAAATCCGCACGCCGATGATGCTCTACCTCTTCCACCGCGTGGATGAGCTGCTGAATGGCCAGCGCGTC
GTCGTCGACATCGACGAGTTCTGGAAGGCTCTGCAGGACGATGCCTTCAAGTCGTTCGCACAGGACGGCC
TCAAGACCTTCCGCAAGCGCAACGCCTTCATGGTCTTTGGCACGCAGTCGCCCGCCGATGCGCTGCGCTC
CTCGATCGCGCATTCGATCATCGAGCAGACCGCGACCAAGATCCTCCTGCCCAACTCCGATGCCAAGCGT
TCGGACTACTGCGAGGGCCTCGGCCTCACGGAGGCGGAATTTAGGCTGATCAAGGAAGACCTGACACCCG
AAAGCCGGTGTTTCCTCATCAAGCAAGGGCACACCTCGATCGTCGCCAAGCTCGATCTGAACGGGATGCT
CGACGAGCTTTCGGTTCTCTCCGGCCGTGCGGAAACGCTGGAGGTCATGGAGGCTGCCATTGCTGAGGCG
GGCACCGATCCGGCGGCCTGGCTGCCGCTCTTCTACGCCAGTGAAAGGAGAAGCTGA