| Protein ID: 334143082 |
 T4SS name [ID] | VirB [27] |
| Gene symbol | - |
| Locus tag | PP1Y_Spl367 |
| Strain | Novosphingobium sp. PP1Y |
| Replicon | plasmid Spl [GenBank: NC_015582] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 36230..38596 [-] |
| Product | type IV secretion system protein VirB4 |
| Component type | VirB4 |
| UniProt ID | F6IBW7 |
| KEGG ID | npp:PP1Y_Spl367 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | CagE_TrbE_VirB [PF03135], Evalue: 1.7e-50, Aligned region: 179..380 AAA_10 [PF12846], Evalue: 1.5e-38, Aligned region: 433..712 TrwB_AAD_bind [PF10412], Evalue: 2.5e-05, Aligned region: 430..468 |
| Protein Sequence: 788 a.a. [Download] |
| >gi|334143082|ref|YP_004537958.1| type IV secretion system protein VirB4 [Novosphingobium sp. PP1Y] MTRFALKHKQVALREEDDIKFIPYTRHVNDTVIALADGSLMRMYRVDGRPFETCDIADLNTWHNKLNIAW RTIGDDRVAVWTHLVRTATNPELDGEFQSDFARDLQARYSERLKEKVLYHNEFYVTIVVRPSNMAGDQLG RLFGKADASQAADDRALAIMADKCRDFESMLADTNPVALSLYERGGVLFSQPMEVLHFIQTGDRIRIPLV RGRLGQAIYNSRIIFGREAAEIRLPDRSHYLGMFGVREYVANTRSGQFNSLLTLDFPYVLTQSFAPLVKS VAAERFQKKYKQMVSSDDAGVSQAEELLDGVDDLMSNRFVMGEHHLSIAVIDDNPKRLLERLSIARAAAA DTGMVMAREDVALEAAFWAQLPGNFRMRARPAVINSRNFAAMSPFHTFPAGRKSGNHWGEAVTLLKTRAG SSFWFNFHRADIGHTLIIGPTGGGKTVLQNFLLAQLEKTGAKQIFFDKDRGAEIFMRACGGTYLALRNGE PTGFAPLKGLEPTHDNMAFLRQFIRVLVRRDNRPLTVTQERTIDEGLDAVMRLPATQRSMSALREMLGYA DAEGIGARLERWCRGGALGWAFDGPADEVSMAARFVGFDMTDFLENPEIRTPMMLYLFHRVDELLNGQRV VVDIDEFWKALQDDAFKSFAQDGLKTFRKRNAFMVFGTQSPADALRSSIAHSIIEQTATKILLPNSDAKR SDYCEGLGLTEAEFRLIKEDLTPESRCFLIKQGHTSIVAKLDLNGMLDELSVLSGRAETLEVMEAAIAEA GTDPAAWLPLFYASERRS |
| Nucleotide Sequence: 2367 bp [Download] |
| >gi|334143044|ref|NC_015582.1|:c38596-36230 Novosphingobium sp. PP1Y plasmid Spl, complete sequence ATGACTAGGTTCGCCCTCAAGCACAAACAGGTCGCATTGCGCGAAGAGGATGACATCAAGTTCATCCCCT ACACCCGGCACGTCAACGACACCGTGATTGCGCTGGCCGATGGCTCGCTCATGCGCATGTACCGGGTCGA TGGCCGTCCGTTCGAGACCTGCGACATTGCCGACCTCAACACCTGGCACAACAAGCTCAATATCGCCTGG CGCACGATCGGCGATGACCGGGTGGCCGTGTGGACGCACCTGGTGCGCACCGCCACCAATCCCGAACTGG ACGGCGAGTTTCAGTCCGACTTCGCGCGCGACTTGCAGGCCAGGTACTCCGAGCGCCTCAAGGAAAAGGT GCTCTACCACAATGAGTTCTACGTCACGATCGTGGTGCGCCCCTCGAACATGGCCGGTGACCAGCTCGGC CGCCTGTTCGGCAAGGCCGATGCCAGCCAGGCCGCCGACGATCGCGCGCTGGCTATCATGGCCGACAAGT GCCGCGACTTCGAGAGCATGCTGGCCGATACCAACCCGGTGGCGCTCTCGCTCTACGAGCGCGGCGGCGT TCTGTTTTCGCAGCCCATGGAAGTGCTGCACTTCATCCAGACCGGGGACCGTATTCGCATCCCGCTCGTC CGCGGTCGGCTCGGACAGGCGATCTACAATTCGCGGATCATCTTCGGGCGCGAGGCGGCCGAGATTCGCC TTCCCGACAGGTCGCATTACCTGGGCATGTTCGGGGTGCGCGAGTACGTCGCGAACACGCGCAGCGGCCA GTTCAACAGCCTTCTGACGCTCGATTTCCCCTATGTGCTGACGCAAAGCTTCGCGCCGCTGGTCAAGTCG GTCGCGGCCGAGCGCTTCCAGAAGAAGTACAAGCAGATGGTCTCCTCGGACGATGCTGGCGTAAGCCAGG CCGAAGAGTTGCTCGATGGCGTCGATGACCTCATGTCGAACCGCTTCGTCATGGGCGAGCATCACCTCTC GATTGCCGTGATCGACGATAATCCCAAGCGCCTGCTCGAACGCCTCTCGATCGCCCGCGCCGCCGCAGCC GATACCGGCATGGTCATGGCGCGCGAGGACGTCGCGCTGGAAGCCGCGTTCTGGGCGCAGCTTCCCGGCA ACTTCAGGATGCGGGCGCGGCCCGCCGTGATCAACAGCCGCAATTTCGCGGCGATGAGCCCGTTTCATAC CTTCCCTGCGGGTCGCAAGTCGGGGAACCACTGGGGCGAGGCGGTGACGCTCTTGAAAACGCGCGCGGGC TCGTCCTTCTGGTTCAATTTCCACCGCGCCGACATTGGCCACACGCTCATCATCGGCCCCACCGGCGGGG GCAAGACGGTCCTGCAGAACTTCCTGCTCGCCCAGCTCGAAAAAACCGGCGCCAAGCAGATTTTCTTCGA CAAGGACCGGGGCGCGGAGATCTTCATGCGCGCCTGCGGCGGAACCTACCTGGCCCTGCGCAACGGCGAG CCGACCGGCTTTGCCCCGCTCAAGGGGCTGGAGCCGACCCACGACAACATGGCGTTTCTGCGCCAGTTCA TCCGCGTCCTGGTCCGGCGCGACAACCGGCCCCTCACCGTCACCCAGGAGCGCACCATCGACGAGGGCCT CGATGCCGTGATGCGTCTTCCTGCCACGCAACGCTCGATGAGCGCGCTTCGCGAAATGCTCGGCTATGCC GATGCCGAAGGCATTGGCGCTCGCCTCGAGCGCTGGTGCCGGGGCGGCGCGCTCGGATGGGCTTTCGATG GCCCGGCCGATGAGGTCTCGATGGCGGCCCGCTTCGTCGGTTTCGACATGACGGACTTTCTCGAAAATCC CGAAATCCGCACGCCGATGATGCTCTACCTCTTCCACCGCGTGGATGAGCTGCTGAATGGCCAGCGCGTC GTCGTCGACATCGACGAGTTCTGGAAGGCTCTGCAGGACGATGCCTTCAAGTCGTTCGCACAGGACGGCC TCAAGACCTTCCGCAAGCGCAACGCCTTCATGGTCTTTGGCACGCAGTCGCCCGCCGATGCGCTGCGCTC CTCGATCGCGCATTCGATCATCGAGCAGACCGCGACCAAGATCCTCCTGCCCAACTCCGATGCCAAGCGT TCGGACTACTGCGAGGGCCTCGGCCTCACGGAGGCGGAATTTAGGCTGATCAAGGAAGACCTGACACCCG AAAGCCGGTGTTTCCTCATCAAGCAAGGGCACACCTCGATCGTCGCCAAGCTCGATCTGAACGGGATGCT CGACGAGCTTTCGGTTCTCTCCGGCCGTGCGGAAACGCTGGAGGTCATGGAGGCTGCCATTGCTGAGGCG GGCACCGATCCGGCGGCCTGGCTGCCGCTCTTCTACGCCAGTGAAAGGAGAAGCTGA |