| Protein ID: 295788899 |
 T4SS name [ID] | VirB [435] |
| Gene symbol | ORF6 |
| Locus tag | pXFRIV16_p06 |
| Strain | Xylella fastidiosa plasmid pXF-RIV16 (NC_014112) |
| Replicon | plasmid pXF-RIV16 [GenBank: NC_014112] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 4255..6531 [-] |
| Product | P6 |
| Component type | VirD4 |
| UniProt ID | D5LLA3 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 5.5e-103, Aligned region: 95..552 TraG-D_C [PF12696], Evalue: 1.7e-25, Aligned region: 398..517 PLDc_2 [PF13091], Evalue: 1.4e-17, Aligned region: 613..729 TrwB_AAD_bind [PF10412], Evalue: 4.4e-15, Aligned region: 160..531 |
| Protein Sequence: 758 a.a. [Download] |
| >gi|295788899|ref|YP_003603494.1| P6 [Xylella fastidiosa] MSKKKIAIAVLVLLLLAMVSVLVMLYVSSGLLVKYLNLGDLTPHLSLPLDLAKFGTKKEKGFGIIALVVS VGLPVMLFGIIAYAALAPKKRELHGSARFATRRELVKSGLLQSDKHDDQYPSILVGKQDKDFLFFRGQQF MFLAAPTRSGKGVGIVIPNLLHYRDSVVVLDIKGENFEITSGFRAKCGQEVHKFAPDDENFQTACWNPLA YVRNDPRFRISDLMSITNILYPPSDDVWASTAESLFLGLALYIMETSKLHSSFNVATIKKMRVSLGCLKD EDTFMAHVKERQPFEPLSEDCITHLRSFAQTSDKLRNSIGISFDQPLGIFSDPMTAKATASNSFDLRDVR KKRMSIYVMVKPANIDKFGKFLNLFFQQLLVLNMDKLPQDDPSLRYQCLLLLDEFPAMGRIAIIEKASAY MAGYNMRLLLIFQSKSQIKDRKLYDETGAQTMLTNMALQVAYAPRDDDDAKDYSEMIGYMTEKGLSKSRQ LGLKSGRSESESDQRRAVLLPQEVKAIGQFKEIISMENMAPALVDKIFWYQEPIFQARANLPHPDVPDQS DLVNTIEPAPPSPTLDFAGAIEEQALPTGATFEVGFSPKRNALEVVMSFVLGAKTELLVAAYSFTSKEIA FALTEAKARGIDVRVVVDHAQNTDDQGGYKAVDYLSSQGIPVFRCENYAAMHHKFMVADGLHVQLGSFNY TSSANLRNAETAVAFRNAPELASLYRTEWLRLSTEPKASVETVMAVDRGLAILKEFGI |
| Nucleotide Sequence: 2277 bp [Download] |
| >gi|295788893|ref|NC_014112.1|:c6531-4255 Xylella fastidiosa plasmid pXF-RIV16, complete sequence ATGAGCAAGAAAAAGATAGCAATCGCCGTATTGGTGTTGCTGTTATTGGCCATGGTATCTGTTCTTGTCA TGCTCTATGTGAGTTCAGGGCTGTTGGTGAAATATCTGAACCTTGGGGATCTGACGCCGCATCTGTCCTT GCCTTTGGATCTGGCCAAGTTTGGCACGAAGAAGGAAAAGGGGTTCGGCATTATCGCCCTAGTGGTTAGC GTTGGCCTGCCTGTCATGCTGTTCGGCATCATTGCTTATGCTGCATTGGCCCCGAAAAAGCGAGAGTTAC ACGGCTCGGCACGGTTCGCCACGCGGCGAGAACTGGTCAAGAGTGGTTTACTACAATCTGACAAACATGA TGATCAGTACCCATCCATTCTTGTAGGAAAACAGGACAAGGATTTTTTATTCTTCCGTGGCCAGCAATTC ATGTTCCTGGCCGCGCCTACACGCTCGGGTAAGGGCGTTGGCATCGTGATTCCCAACCTGCTCCATTACC GTGACTCGGTGGTCGTGCTGGATATCAAGGGCGAGAACTTCGAAATTACTTCTGGCTTCCGTGCCAAGTG CGGTCAGGAGGTTCACAAGTTCGCGCCGGATGACGAGAACTTTCAAACCGCCTGCTGGAACCCATTGGCC TACGTGCGCAATGACCCGCGTTTTCGCATCAGCGACTTAATGAGCATCACCAATATTCTGTATCCGCCCA GTGATGACGTGTGGGCCTCCACGGCTGAAAGCTTGTTTCTTGGTCTGGCGCTTTACATCATGGAGACATC TAAGCTGCACAGCAGCTTCAACGTGGCTACGATCAAGAAAATGCGTGTCAGCCTCGGTTGTTTGAAGGAT GAGGACACCTTCATGGCTCACGTCAAAGAACGTCAGCCTTTTGAACCGCTTTCTGAGGACTGTATTACCC ACTTACGCAGCTTCGCACAGACTAGCGACAAGTTGCGCAATAGCATTGGGATTTCGTTCGATCAGCCCTT GGGCATCTTCAGCGACCCGATGACTGCAAAAGCGACGGCCTCCAACAGCTTCGATCTGCGCGACGTGCGC AAAAAGCGCATGAGTATCTATGTGATGGTGAAGCCTGCAAATATTGACAAGTTCGGTAAGTTTTTGAATC TTTTTTTTCAGCAGCTTCTTGTACTGAACATGGACAAGCTGCCGCAGGATGACCCCAGCCTGAGGTACCA ATGCCTGTTGCTGCTTGATGAGTTCCCTGCCATGGGGCGCATCGCCATCATTGAAAAGGCATCGGCGTAC ATGGCTGGGTACAACATGCGCTTGCTGTTGATTTTCCAAAGCAAAAGCCAGATTAAAGACCGCAAGCTAT ACGACGAAACCGGCGCTCAAACCATGTTGACCAACATGGCCTTGCAGGTTGCATATGCCCCCCGTGACGA CGATGATGCAAAGGATTACAGCGAGATGATCGGTTACATGACCGAGAAGGGTTTATCTAAGTCTCGTCAA CTCGGCCTGAAGTCCGGGCGCAGTGAATCCGAAAGCGATCAACGCCGTGCGGTATTACTTCCCCAAGAAG TGAAAGCGATCGGCCAGTTCAAAGAGATCATCAGCATGGAGAACATGGCTCCGGCGCTGGTAGACAAAAT ATTTTGGTATCAAGAACCGATTTTTCAGGCTAGGGCAAACCTGCCACACCCTGATGTTCCTGACCAAAGC GATCTGGTCAACACAATTGAACCAGCTCCCCCCTCCCCTACTCTGGACTTTGCAGGCGCGATTGAGGAGC AAGCATTACCCACTGGGGCGACGTTTGAAGTTGGGTTCTCACCCAAGCGTAATGCCCTTGAAGTGGTCAT GTCGTTCGTACTGGGTGCCAAAACTGAACTCCTGGTAGCCGCATACTCGTTCACCAGCAAGGAAATCGCA TTTGCCTTGACTGAGGCCAAGGCACGCGGCATTGATGTTCGCGTGGTGGTTGATCACGCGCAAAACACAG ACGATCAGGGGGGCTATAAGGCCGTCGATTATCTGTCGTCACAAGGTATCCCTGTTTTTAGGTGCGAGAA CTATGCGGCGATGCACCACAAGTTCATGGTGGCTGATGGTCTGCATGTACAACTCGGGAGCTTTAACTAC ACATCTTCGGCAAACCTACGCAACGCCGAAACGGCGGTAGCATTCCGCAACGCCCCTGAGCTGGCCAGCT TGTATAGGACGGAATGGCTGCGCCTGTCCACTGAACCCAAGGCATCGGTTGAAACGGTCATGGCCGTTGA TCGTGGCTTGGCCATCCTCAAGGAATTTGGAATTTAA |