| Protein ID: 239820493 |
 T4SS name [ID] | VirB [418] |
| Gene symbol | - |
| Locus tag | Vapar_5823 |
| Strain | Variovorax paradoxus S110 |
| Replicon | chromosome 2 [GenBank: NC_012792] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 528764..530719 [+] |
| Product | TRAG family protein |
| Component type | VirD4 |
| UniProt ID | C5D068 |
| KEGG ID | vap:Vapar_5823 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 1.2e-104, Aligned region: 101..544 TrwB_AAD_bind [PF10412], Evalue: 8.4e-28, Aligned region: 160..528 TraG-D_C [PF12696], Evalue: 2.5e-25, Aligned region: 393..513 |
| Protein Sequence: 651 a.a. [Download] |
| >gi|239820493|ref|YP_002947678.1| TRAG family protein [Variovorax paradoxus S110] MTLAPRYEGLPSPFRIAVALLIAALVGMYVAGQAFLFAMNLPPQHATLLTLHEYWQAYGERPDVRRVLIA SLVGSQGLMLGLVGIAMLPRRRPLHGNARFASRREIARSGLLNEHGIILGRLGNRYLVLPGQQGVALEAP PRSGKGVGVVIPNLLNWPGSAIISDIKGENFMRTAGFRAAHGQQVHLFDPLSERERSARWNPLGYVSETP YRCIDDLQRIGTMLFPDPQAGDPFWTSSARSLFLGIALYLFETKGATRTLGEILRQGMASDAEGFQKHWK RVIDACERAGYPLSQEAVQSLYDVIDLAPTTASSIRKTFTSRLDLWLNPMIDATTSANDFDLRALRKHPI SIYVQINPDNIARLQPLLNLFFQQAIGLQTRELPENNPELRHQVLLMLDEFPALGRIPVIADSTAFLPGY NVRAVIIVQSNSQLIEKYGIEGAKSIRKMLAARIVFPPKEYEDAEAISRELGTYTVRQKNISRPMWGGAN KEPTVTISEQPRRLLLPQEVKELGPDRMILFYEGLRPVLAHRILYFRDRLFAPRELPPPLVPKLNVDKPG GAATTVPAAMLDDRKDTSGTGPGSLSNATPPDGGAAPTARQAAAVASNVLNDDLKLDDFSFDFDDVEIPT EKLSDEDLKRHADEFMARILD |
| Nucleotide Sequence: 1956 bp [Download] |
| >gi|239819985|ref|NC_012792.1|:528764-530719 Variovorax paradoxus S110 chromosome 2, complete genome ATGACCCTGGCACCAAGATACGAAGGCTTGCCTAGTCCCTTCAGAATCGCGGTCGCGCTGCTGATCGCGG CGCTGGTCGGCATGTACGTCGCCGGCCAAGCGTTCCTGTTCGCGATGAATCTGCCGCCACAGCACGCCAC GCTGCTGACCCTTCACGAGTACTGGCAGGCCTACGGCGAGCGGCCGGACGTGCGCCGTGTCCTCATTGCG TCGCTGGTCGGCTCCCAGGGGCTGATGCTCGGTCTGGTCGGAATTGCCATGCTGCCCCGCCGCCGGCCGC TGCATGGAAATGCCCGGTTTGCGAGCCGTCGCGAGATCGCGCGATCGGGCCTCCTGAACGAGCACGGCAT CATCCTCGGGCGGCTCGGCAATCGCTACCTGGTGCTTCCCGGCCAGCAGGGCGTCGCACTCGAGGCACCG CCGCGCAGTGGCAAGGGCGTCGGCGTGGTCATCCCCAATCTGCTGAACTGGCCCGGCTCGGCCATCATCA GCGACATCAAGGGCGAGAACTTCATGCGCACCGCCGGCTTCCGTGCGGCCCATGGGCAGCAGGTGCACCT GTTCGATCCCCTGTCCGAGCGCGAGCGCTCGGCTCGCTGGAATCCGCTCGGCTATGTCTCCGAGACGCCC TACCGCTGCATCGACGATCTGCAGCGCATCGGCACGATGCTCTTTCCCGATCCACAGGCCGGCGATCCCT TCTGGACCTCCTCGGCCCGATCTCTATTCCTGGGCATTGCCCTCTATCTCTTCGAGACCAAAGGGGCCAC GCGCACCTTGGGCGAGATCCTGCGCCAGGGCATGGCCAGCGATGCCGAGGGCTTTCAGAAACACTGGAAG CGTGTCATTGATGCCTGCGAGCGCGCCGGGTATCCCTTGTCGCAGGAAGCGGTGCAGAGCCTCTACGACG TGATCGACTTGGCACCGACCACGGCCTCCAGCATCCGCAAGACCTTCACCAGCCGCCTGGACCTGTGGCT CAACCCGATGATCGATGCGACCACCTCGGCCAACGATTTCGACCTGAGGGCACTGCGCAAGCATCCGATC TCGATCTATGTCCAGATCAACCCCGACAACATCGCCCGGCTGCAGCCGCTGCTGAACCTGTTCTTCCAGC AGGCGATCGGCCTGCAAACGCGGGAACTCCCCGAGAACAATCCCGAGCTTCGCCACCAGGTGCTCCTGAT GCTCGACGAATTTCCGGCGCTCGGGCGCATTCCCGTCATCGCCGACTCCACGGCCTTCCTGCCCGGCTAC AACGTGCGCGCCGTAATCATCGTCCAGTCCAATTCGCAACTGATCGAGAAGTACGGTATCGAGGGCGCCA AGTCGATCCGCAAGATGCTCGCGGCGCGCATCGTGTTCCCACCCAAGGAGTACGAGGACGCCGAGGCCAT CTCGCGAGAGCTGGGGACCTACACCGTCCGACAGAAGAACATCAGCCGCCCGATGTGGGGCGGTGCGAAC AAGGAGCCCACCGTGACCATCAGCGAGCAGCCGCGCCGCCTGCTGCTGCCCCAGGAGGTCAAGGAACTGG GACCGGACCGGATGATCCTGTTCTACGAAGGCCTGCGGCCGGTGCTGGCGCATCGGATCCTCTACTTTCG CGACAGGTTATTTGCCCCACGCGAACTGCCGCCACCACTGGTGCCGAAGCTGAACGTCGATAAGCCCGGC GGCGCCGCCACAACCGTGCCGGCGGCAATGCTCGATGACAGGAAAGACACGTCCGGCACAGGTCCCGGAT CCCTCTCCAACGCCACGCCTCCGGACGGTGGCGCCGCGCCGACGGCCCGGCAGGCCGCTGCCGTAGCCAG CAATGTATTGAACGACGACTTGAAGTTGGACGACTTCTCGTTCGACTTCGACGACGTGGAGATTCCCACG GAGAAGCTCAGCGACGAGGACCTGAAGCGCCACGCCGATGAGTTCATGGCGCGAATCCTGGACTGA |