| Protein ID: 237797179 |
 T4SS name [ID] | VirB [382] |
| Gene symbol | traB |
| Locus tag | pNAH20_p73 |
| Strain | Pseudomonas fluorescens plasmid pNAH20 (NC_012674) |
| Replicon | plasmid pNAH20 [GenBank: NC_012674] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 63478..65034 [+] |
| Product | putative TraB protein |
| Component type | VirD4 |
| UniProt ID | C3KFS2 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 4e-124, Aligned region: 125..499 TraG-D_C [PF12696], Evalue: 2.2e-20, Aligned region: 363..480 T4SS-DNA_transf [PF02534], Evalue: 3.7e-18, Aligned region: 284..487 AAA_10 [PF12846], Evalue: 4.3e-10, Aligned region: 139..185 |
| Protein Sequence: 518 a.a. [Download] |
| >gi|237797179|ref|YP_002887473.1| putative TraB protein [Pseudomonas fluorescens] MHKREVDSAVMTAGFGLPIAGWAAGVYLAQMPLTPFPAAFKETLHNGWQNPIVLGATIATSAVAASLVYY LYEYCDDGFRGEQYQEFLRGSEIKNWHTVKAKVRRRNEKTNRERKKRGLAKSEPVMIGKLPMPLHLEDRN TMICASIGAGKSVTMEGMIASALKRGDRMAVVDPNGTFYSKFSFKGDYILNPFDARSAGWTIFNEIRGIH DFNRMAKSIIPPQVDPSDEQWCAYARDVLSDTMRKLKETNNPNQDTLVNLLVREDGDTIRAFLANTDSEG YFRDNAEKAIASIQFMMNKYIRPLRYMSKGDFSIYQWVNDPNAGNLFITWREDMRDTMKPLVATWIDTIC ATILSSEPMTGKRLWLFLDELQSLGKLESFVPAATKGRKHGLRMVGSLQDWSQLNASYGRDDAETLLSCF RNYVILAAANAKNAGMASEILGSHDVKRWRKSYTAGKLTRTEEVTRDEPVVQASEISNLPDLVAYVKFGE DFPITKVKTPYIDYKERAQAIMITGQAA |
| Nucleotide Sequence: 1557 bp [Download] |
| >gi|237797106|ref|NC_012674.1|:63478-65034 Pseudomonas fluorescens strain PC20 plasmid pNAH20, complete sequence ATGCATAAAAGAGAAGTCGATTCTGCAGTGATGACAGCGGGTTTCGGTTTGCCGATCGCTGGATGGGCAG CAGGCGTTTATTTGGCACAGATGCCGTTGACGCCATTCCCTGCAGCGTTCAAGGAAACGCTTCACAACGG CTGGCAGAACCCGATTGTACTGGGGGCCACAATTGCCACGTCAGCGGTCGCCGCTTCGCTGGTTTATTAC CTGTACGAGTATTGTGACGATGGGTTCCGGGGCGAGCAGTACCAGGAATTTTTGCGGGGCTCGGAGATAA AAAACTGGCATACCGTCAAGGCAAAGGTGCGCCGCCGTAACGAGAAGACGAATCGCGAGCGGAAAAAGCG AGGGTTGGCCAAGTCTGAGCCGGTCATGATTGGCAAGCTGCCTATGCCTCTGCACCTTGAAGATCGAAAC ACGATGATCTGCGCGTCTATCGGTGCCGGTAAGTCGGTGACCATGGAAGGCATGATCGCCTCGGCATTGA AGCGTGGTGATCGCATGGCCGTTGTCGACCCAAACGGCACGTTCTATTCGAAATTCAGTTTCAAAGGCGA TTACATTCTCAACCCATTCGACGCCCGCTCCGCTGGCTGGACCATCTTCAACGAGATCCGTGGCATCCAT GACTTCAACCGGATGGCCAAGTCGATAATCCCGCCCCAGGTCGACCCGAGTGACGAGCAATGGTGCGCGT ACGCTCGCGACGTATTGTCCGACACCATGCGCAAGCTGAAAGAAACCAACAACCCGAACCAAGACACGCT GGTGAATTTGCTGGTGCGGGAGGATGGCGACACCATCCGCGCTTTCCTGGCCAACACGGACTCCGAGGGC TACTTCCGCGACAACGCAGAGAAGGCAATCGCCAGCATCCAGTTCATGATGAACAAATACATTCGTCCGC TGCGCTACATGAGCAAGGGCGATTTTTCCATCTACCAATGGGTGAACGATCCTAATGCCGGCAATCTGTT CATCACTTGGCGGGAGGACATGCGGGACACCATGAAACCACTGGTGGCCACGTGGATTGACACCATCTGT GCAACGATCCTCAGCTCAGAGCCGATGACAGGCAAACGGCTATGGCTGTTCCTCGACGAGCTGCAGTCCC TCGGCAAACTGGAAAGCTTCGTTCCTGCGGCGACCAAAGGGCGGAAACATGGTCTGCGTATGGTCGGCAG CCTGCAGGATTGGTCGCAACTCAACGCCAGTTATGGCCGTGACGATGCGGAAACGCTGCTTTCGTGCTTC CGAAATTACGTCATTCTTGCTGCAGCGAACGCCAAGAACGCAGGCATGGCCAGCGAAATCCTCGGCTCTC ACGATGTTAAGCGTTGGCGGAAATCCTACACCGCGGGCAAGTTGACCAGGACCGAGGAAGTCACGCGGGA TGAGCCGGTGGTTCAGGCTTCTGAAATCTCCAACCTTCCAGATCTGGTCGCCTACGTGAAATTCGGTGAA GACTTCCCGATCACCAAGGTAAAGACGCCGTACATTGATTACAAAGAGCGCGCCCAGGCAATCATGATAA CCGGTCAAGCCGCGTAA |