| Protein ID: 210134651 |
 T4SS name [ID] | VirB [607] |
| Gene symbol | virD4-1 |
| Locus tag | HPP12_0454 |
| Strain | Helicobacter pylori P12 |
| Replicon | chromosome [GenBank: NC_011498] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 476105..477832 [-] |
| Product | VirD4 coupling protein |
| Component type | VirD4 |
| UniProt ID | B6JL32 |
| KEGG ID | hpp:HPP12_0454 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 4.7e-68, Aligned region: 83..563 TrwB_AAD_bind [PF10412], Evalue: 9.1e-29, Aligned region: 323..542 TraG-D_C [PF12696], Evalue: 3e-23, Aligned region: 411..531 AAA_10 [PF12846], Evalue: 8.2e-10, Aligned region: 82..487 |
| Protein Sequence: 575 a.a. [Download] |
| >gi|210134651|ref|YP_002301090.1| VirD4 coupling protein [Helicobacter pylori P12] MREKFKTLRDKFKDKTSNLFHKLNSIQKDYYTKTLPKACKDVFTLGSSKSYPMTLNFNKGFCVGLYKGLN SLKPTYYDAPLSTLIIAPPGSGKTAAVAVPNLLSVPSSCVVLDIKGELFDLTAGYRQQVLKNKIFVFDPL GNDNTLKFNPFDKRIVEKLDFNRKRRLVDEVGNTIFAEDGANKDPHWTQQAKNLFVFYALYDLCVHNTST FFEIASAPIKNYVPLINPQSRFYTELYECQSSDNGFVKENGRYMAKVENGVKKMKPNANVELLWYKQVAE QVYTDPENPKNYDGSVNHLEKDDQGNVIMKEGMLDPIIRNEANKWAKANDKEFASIKSVYSRFMQVFTSY QVKSATDSMSFEYEDLRADNISLYIKIAQTDIDTLAPLIRILLESIAKNLLLKESKKFEERVYLFLDEFV RFGKLPFLLEMPALSRSYGVVLIFITQPNALIEKYYGREDARIVNSTVAYKIIFKMDDLEYAKQVSEEVG KMTRKTRSHSTEKGQLITGGTSSIGKEAWDLLSAQDIMNIDKDEVIVLVSGHKAKPLKLKANYYFKNKEL LSRINWEVKPNEEVF |
| Nucleotide Sequence: 1728 bp [Download] |
| >gi|210134201|ref|NC_011498.1|:c477832-476105 Helicobacter pylori P12 chromosome, complete genome ATGAGAGAAAAATTCAAAACATTAAGAGATAAATTTAAGGATAAAACCAGCAATTTATTCCATAAGCTTA ATAGCATTCAAAAAGATTATTACACTAAAACTCTCCCTAAGGCTTGCAAAGATGTCTTTACGCTAGGTTC TTCTAAGAGTTATCCTATGACCTTAAATTTTAACAAAGGTTTTTGTGTGGGGCTGTATAAAGGTTTAAAT TCGCTTAAGCCTACTTATTATGATGCTCCGCTTTCTACTTTAATTATCGCTCCTCCTGGAAGTGGTAAAA CCGCAGCTGTGGCTGTGCCTAATCTTTTAAGTGTGCCTAGCTCTTGTGTGGTGTTAGATATTAAAGGGGA GTTGTTTGATTTAACGGCTGGTTACAGACAACAAGTTCTAAAAAATAAAATTTTTGTATTTGATCCTTTA GGAAATGATAACACGCTTAAATTCAATCCGTTTGATAAACGCATTGTAGAAAAATTAGATTTTAACAGAA AGCGAAGGCTTGTAGATGAAGTGGGTAATACTATTTTTGCTGAAGATGGGGCAAATAAAGACCCTCATTG GACACAGCAAGCTAAAAATTTATTTGTCTTTTACGCTCTTTATGATTTGTGTGTGCATAACACTAGCACC TTTTTTGAAATTGCAAGCGCTCCTATAAAAAATTATGTCCCCTTAATCAATCCACAAAGCCGATTTTATA CTGAATTATATGAATGCCAAAGTAGCGATAATGGTTTTGTTAAAGAGAATGGGCGTTATATGGCTAAAGT AGAAAATGGCGTTAAAAAAATGAAACCTAATGCCAATGTGGAATTGCTATGGTATAAACAAGTAGCCGAA CAAGTCTATACTGACCCAGAAAATCCTAAAAATTATGATGGATCTGTGAATCATTTAGAAAAAGACGATC AAGGCAATGTTATAATGAAAGAGGGTATGTTAGATCCTATTATTAGAAACGAAGCGAACAAATGGGCTAA GGCGAATGATAAAGAGTTTGCGAGCATTAAATCAGTTTATAGCCGTTTTATGCAAGTCTTTACAAGCTAT CAAGTTAAAAGCGCTACAGATAGCATGAGTTTTGAATACGAGGATTTAAGGGCTGACAATATTTCACTCT ATATTAAAATCGCTCAAACAGATATTGACACACTCGCACCGCTTATCCGTATCCTTTTGGAAAGTATTGC TAAAAATCTTTTATTGAAAGAGAGTAAGAAATTTGAAGAAAGGGTTTATCTCTTTTTAGATGAATTTGTG CGTTTTGGTAAATTGCCTTTTTTATTAGAAATGCCAGCATTAAGTAGGAGCTATGGTGTGGTTTTAATTT TTATCACGCAACCCAACGCTCTTATTGAAAAATATTATGGCAGAGAAGATGCAAGAATTGTTAATAGCAC CGTGGCTTACAAAATAATTTTCAAAATGGATGATTTAGAATATGCTAAACAAGTGAGCGAAGAAGTCGGT AAGATGACTAGAAAAACACGAAGCCACTCTACAGAAAAAGGACAACTCATTACCGGAGGGACTTCTAGCA TAGGTAAAGAGGCGTGGGACTTATTGAGCGCGCAAGATATTATGAATATTGATAAAGATGAAGTGATCGT TTTAGTAAGCGGTCATAAGGCTAAACCCTTAAAATTAAAAGCGAATTATTATTTCAAAAACAAAGAATTA CTCTCTCGTATTAACTGGGAAGTCAAGCCCAATGAAGAAGTGTTTTGA |