| Protein ID: 187921966 |
 T4SS name [ID] | VirB [782] |
| Gene symbol | - |
| Locus tag | Bphyt_7341 |
| Strain | Burkholderia phytofirmans PsJN |
| Replicon | plasmid pBPHYT01 [GenBank: NC_010679] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 65197..66885 [+] |
| Product | type IV secretion system protein VirD4 |
| Component type | VirD4 |
| UniProt ID | B2TH73 |
| KEGG ID | bpy:Bphyt_7341 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 1.8e-99, Aligned region: 115..499 TraG-D_C [PF12696], Evalue: 1.2e-14, Aligned region: 362..479 T4SS-DNA_transf [PF02534], Evalue: 1.7e-13, Aligned region: 264..462 AAA_10 [PF12846], Evalue: 1.1e-06, Aligned region: 130..434 |
| Protein Sequence: 562 a.a. [Download] |
| >gi|187921966|ref|YP_001893555.1| type IV secretion system protein VirD4 [Burkholderia phytofirmans PsJN] MVMRRYDDRYKPAAFFSVVLATFLVWFWSVHRLFVLPPAIFLAAWRAAKVTPDVPAIWVPTAVAFSYGLL VMGVIFGYFKSGFEGADYVMYLRGARMVGHARLKDMTRKFFYKHLRIAGVPIPEWLEALHFRVIGSTGAG KSVVISDYIESALARRERMICIDPNGQFMEKFYREGDIIINPFEARTKFWGIFNEIRTPYDVASYSISLI PKSPSTEQEIWNAMARTISSEVMLKLWRLGIGDTDHLVYWLTIASNEQLMEMLADTAARGMFHGAEETIG SVRAVLTRYITPHKYLSDIETVEGYFSLREWIDSNAEDQPNVWIIWREDQLASLKPLISCMFDVACNAAL SKPITDETVATHLVVDEVDSLEKLNYLVPAATKGRKHRLHICAGMQSDAQLDGTNGKDDAMTVRNSLRTT VALGIAEGDTYTAEQLSKGLGEHEVIRQRTTASDTGRDSHGQEVIKERVVIPSQITGLPNLTGYLKLAGD WPICKFTMPYKKRKAVTEAFIMAQNRWTMDAEAANEQARMDFSRAKRAATDVDARDVDDDDSPSPALESS RP |
| Nucleotide Sequence: 1689 bp [Download] |
| >gi|187921867|ref|NC_010679.1|:65197-66885 Burkholderia phytofirmans PsJN plasmid pBPHYT01, complete sequence ATGGTGATGCGTCGTTACGATGACAGATACAAGCCGGCGGCCTTCTTCAGCGTCGTGCTGGCGACGTTCC TGGTCTGGTTCTGGTCTGTCCACCGACTATTCGTGTTGCCTCCGGCGATCTTTCTCGCCGCGTGGCGCGC GGCAAAAGTCACCCCCGACGTTCCGGCCATATGGGTGCCAACCGCTGTTGCGTTCTCGTATGGTCTGCTC GTAATGGGTGTTATTTTTGGCTACTTCAAAAGTGGTTTCGAAGGCGCTGATTATGTGATGTATCTGCGCG GCGCGAGAATGGTCGGGCATGCGCGCCTCAAAGATATGACGAGGAAATTCTTCTATAAGCATCTTCGTAT TGCCGGCGTTCCTATTCCTGAGTGGCTTGAGGCATTACATTTTCGCGTTATCGGGTCGACCGGTGCCGGT AAATCGGTTGTGATATCAGATTATATCGAGTCGGCGCTCGCGCGACGCGAAAGAATGATCTGTATTGACC CTAATGGTCAGTTCATGGAGAAATTTTATCGCGAAGGCGATATTATTATTAATCCGTTTGAGGCGCGGAC AAAATTTTGGGGAATATTCAATGAAATCAGAACGCCCTACGATGTAGCCTCTTATTCGATAAGTTTGATA CCGAAAAGCCCAAGCACCGAGCAGGAAATTTGGAATGCAATGGCCCGGACGATTAGCAGTGAAGTAATGC TGAAACTCTGGCGGCTTGGCATTGGCGATACGGACCATCTGGTTTACTGGCTGACAATCGCGTCTAACGA GCAATTAATGGAAATGCTCGCCGACACTGCTGCGCGCGGTATGTTTCACGGCGCGGAGGAAACGATTGGT AGCGTTCGCGCGGTTCTGACACGCTATATCACTCCGCATAAATACCTTTCGGACATCGAGACCGTCGAAG GCTATTTCAGCCTGCGCGAATGGATCGACTCGAACGCCGAGGATCAGCCCAACGTCTGGATTATCTGGCG AGAGGACCAGCTTGCATCCCTGAAGCCGCTGATCTCATGCATGTTCGACGTTGCATGCAATGCCGCCCTC TCCAAGCCAATTACGGATGAAACCGTCGCGACCCATCTGGTTGTTGACGAGGTGGACTCGCTCGAAAAGC TCAACTACCTTGTGCCGGCCGCCACGAAGGGCCGAAAACACCGCCTGCATATTTGCGCGGGGATGCAGTC TGACGCCCAGCTCGACGGCACCAACGGCAAAGACGACGCCATGACCGTTCGAAACAGCCTGCGCACGACC GTCGCCCTTGGTATAGCCGAGGGTGATACCTATACCGCCGAACAACTGTCAAAGGGACTCGGTGAACATG AGGTAATTCGGCAGCGCACCACGGCTTCGGACACTGGCCGCGACTCGCATGGGCAGGAAGTAATCAAGGA ACGCGTGGTCATTCCCTCGCAGATCACTGGATTGCCGAACCTCACCGGCTATCTGAAGCTCGCGGGAGAC TGGCCCATCTGCAAGTTCACGATGCCCTACAAGAAACGCAAGGCCGTTACCGAGGCGTTCATCATGGCGC AGAACCGCTGGACGATGGATGCTGAAGCAGCCAACGAACAGGCGCGGATGGACTTCTCGCGCGCGAAGCG TGCCGCAACTGACGTAGACGCTAGGGACGTTGATGACGACGACTCCCCTAGCCCCGCCCTCGAATCCTCC CGGCCATAA |