SecReT4
Protein ID: 159046515
T4SS name [ID]VirB [469]
Gene symbol-
Locus tagDshi_3976
StrainDinoroseobacter shibae DFL 12
Repliconplasmid pDSHI03 [GenBank: NC_009957] [Browse all T4SS(s) in this replicon]
Location [Strand]34700..37063 [+]
ProductCagE TrbE VirB component of type IV transporter system
Component typeVirB4
UniProt IDA8LTZ6
KEGG IDdsh:Dshi_3976
PDB IDNA
Domain hit(s) vs Pfam AAA_10 [PF12846], Evalue: 1.5e-33, Aligned region: 439..707
CagE_TrbE_VirB [PF03135], Evalue: 2.4e-27, Aligned region: 186..379
TrwB_AAD_bind [PF10412], Evalue: 9e-06, Aligned region: 438..475
Protein Sequence: 787 a.a.     [Download]
>gi|159046515|ref|YP_001542185.1| CagE TrbE VirB component of type IV transporter system [Dinoroseobacter shibae DFL 12]
MPREAALDLRTMTPEWYARETRLAHMLPYVSLVDHQTVRTRVNELFQCIRLDGVNSYTTDDAYLDKVTAL
FARIIAQLGPEFSYYVHKVSKAITPDLEPLREDSFAGEVDRLWRKKLETSGLRDKTLTLTIIHRPPPKSV
LPFLNRSAPDRLKEATEKRLRRLGEAVNVFLSGLTELNPRVLSAKSGELIGFLGALNTGQELPLYPANTY
GFLSFNVANTRVTFQGDHFELSEGVVGHRYGKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHSFTPINSNL
MAGRIKRQKRQMQASQDAALSLLEALDIAADDLEAKRQSFGEHHMVVTLFCETLDELQTLSAEIVNAAAT
EGVKMIGERVAAKAHYLSQHPGNQPKRVRASAVTNRNFADFAAFHRTQLGKPAALTPWGRVVTYLPTPEQ
SAYRFSYHEQGSPDKEPTSGHTLIMGRPGSGKSVLSAFLMTQARRAGARIFVFDYRLGMEMAVRANGGRY
ASLNAGQPTGLNPLWTETDARGTAWLSDWLATLLYRADKPLTPAQTNRIQEVVRQNAQASNPALRNWRDF
ASLFVSTDDGGDLHQRLLEWSEDGRYGWIFGQSLEDTFSLKGDVVGFDLTGILDSEADKERMAVLSYLFR
RVEREIEDRRPTIIVIDEAWKALDNAYFAERLSNWLVTARKQNTVAVMMTQYASQLERTRTGKTIVEAVP
TQILLPNIRAQPADYAMLNLTEKELDVLLNTGSNSRLALIRDDQGSIVVDADLSALGPTLTILGGMEKGE
ALVGADYRDRPDFWRLS
 
Nucleotide Sequence: 2364 bp     [Download]
>gi|159046469|ref|NC_009957.1|:34700-37063 Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence
ATGCCCCGTGAAGCCGCGCTTGATCTCCGCACGATGACGCCGGAGTGGTATGCGCGCGAGACCCGCCTCG
CGCACATGCTGCCCTATGTGAGCCTCGTCGATCACCAGACCGTGCGGACCCGGGTCAACGAGCTTTTCCA
GTGCATCCGGCTCGACGGGGTCAATAGCTATACGACCGATGACGCCTATCTCGACAAGGTGACCGCGCTC
TTTGCCCGGATCATTGCGCAATTGGGGCCGGAGTTCAGCTATTACGTCCATAAGGTCTCGAAGGCGATCA
CGCCGGACCTCGAGCCGCTGCGCGAGGACAGTTTCGCGGGAGAAGTCGACCGGCTCTGGCGCAAGAAGCT
AGAGACCAGCGGGCTGCGCGACAAGACGCTCACCCTTACGATCATCCATCGCCCGCCTCCAAAAAGCGTC
CTGCCATTCCTGAACCGCAGCGCGCCGGATCGCCTCAAGGAAGCGACCGAGAAGCGCCTTCGCCGATTGG
GCGAGGCCGTGAACGTGTTCCTGTCTGGCCTGACGGAGCTTAACCCACGTGTGCTTTCGGCCAAGTCCGG
CGAGTTGATTGGCTTCCTAGGGGCCCTCAACACTGGCCAGGAACTGCCGCTCTATCCGGCGAACACCTAT
GGCTTCCTGTCCTTCAACGTCGCCAACACGCGAGTGACGTTTCAAGGCGATCATTTCGAGCTCTCGGAAG
GCGTCGTGGGCCATCGCTACGGCAAGAGTTTCACCATCGGGGAATACTCGGAAGGCACCTCCTGCACCAT
GTTCGACATGCTGAACCTGCCGGTCGACATGATCGTCACCCATTCCTTCACACCGATCAATTCGAACCTC
ATGGCGGGCCGCATCAAGCGGCAAAAGCGCCAGATGCAGGCGAGCCAGGACGCGGCCCTCTCGCTCCTGG
AAGCGCTCGACATCGCCGCCGATGATCTCGAGGCCAAGCGCCAAAGCTTCGGCGAGCATCACATGGTCGT
GACGCTCTTCTGCGAAACGCTGGACGAGCTGCAGACGCTCAGCGCCGAAATCGTGAACGCCGCCGCGACC
GAAGGCGTGAAGATGATCGGTGAGCGGGTCGCCGCAAAGGCCCATTACCTCAGCCAGCATCCCGGCAACC
AGCCCAAGCGCGTGCGTGCCAGCGCCGTCACCAATCGCAACTTCGCGGATTTTGCGGCCTTTCACCGGAC
ACAGCTCGGCAAACCCGCAGCACTTACCCCTTGGGGCCGGGTCGTCACATATTTGCCTACGCCCGAGCAA
AGCGCCTATCGGTTTTCCTATCACGAGCAAGGCTCGCCCGACAAAGAACCGACCAGCGGCCATACCCTGA
TCATGGGACGACCCGGGTCGGGCAAATCGGTGCTGTCGGCCTTCCTGATGACCCAAGCCCGTCGAGCAGG
GGCGCGGATCTTCGTCTTCGATTACCGTCTTGGTATGGAGATGGCGGTCCGCGCGAATGGCGGGCGCTAC
GCGTCCCTGAACGCAGGCCAGCCCACGGGTCTCAATCCGCTCTGGACCGAAACCGATGCGCGGGGGACCG
CCTGGCTCTCGGACTGGCTTGCCACGCTTCTCTACCGCGCCGACAAGCCCCTGACGCCCGCACAGACCAA
CCGCATCCAGGAAGTCGTGCGCCAGAATGCCCAGGCCTCCAATCCGGCCCTGCGGAACTGGCGGGATTTC
GCATCGCTTTTTGTGTCCACCGATGATGGCGGCGATCTGCACCAGCGCCTGCTCGAATGGTCTGAGGACG
GCCGCTATGGCTGGATCTTCGGGCAGAGCCTCGAGGACACCTTCTCGCTCAAAGGCGATGTCGTGGGCTT
CGATCTGACCGGCATTCTCGACAGCGAGGCCGACAAGGAGCGGATGGCGGTTCTCTCCTATCTTTTCCGC
CGGGTCGAACGCGAGATCGAGGATCGCCGCCCCACCATCATCGTGATCGACGAGGCCTGGAAGGCCCTCG
ATAACGCGTATTTCGCCGAGCGGCTGTCGAACTGGCTGGTGACCGCGCGCAAGCAGAACACCGTCGCGGT
GATGATGACGCAATACGCGAGCCAGCTCGAGCGCACCCGGACCGGCAAGACCATCGTCGAGGCCGTGCCG
ACGCAGATCCTGCTGCCCAATATCCGCGCGCAGCCTGCGGATTACGCCATGCTGAACCTCACGGAGAAGG
AACTCGACGTCCTTCTCAACACGGGCAGCAACAGCCGCCTGGCGCTGATCCGCGACGATCAGGGCTCGAT
CGTCGTCGATGCCGATCTGAGCGCCCTTGGTCCCACGCTCACCATCCTCGGCGGCATGGAGAAAGGCGAG
GCGCTCGTCGGCGCCGATTACCGCGACCGCCCAGACTTCTGGAGGCTTTCATGA