| Protein ID: 159046197 |
 T4SS name [ID] | VirB [470] |
| Gene symbol | - |
| Locus tag | Dshi_3655 |
| Strain | Dinoroseobacter shibae DFL 12 |
| Replicon | plasmid pDSHI01 [GenBank: NC_009955] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 55361..57364 [-] |
| Product | TRAG family protein |
| Component type | VirD4 |
| UniProt ID | A8LT21 |
| KEGG ID | dsh:Dshi_3655 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 3e-87, Aligned region: 127..541 TraG-D_C [PF12696], Evalue: 4e-28, Aligned region: 386..507 TrwB_AAD_bind [PF10412], Evalue: 1.1e-17, Aligned region: 135..521 AAA_10 [PF12846], Evalue: 3.2e-08, Aligned region: 134..467 |
| Protein Sequence: 667 a.a. [Download] |
| >gi|159046197|ref|YP_001541869.1| TRAG family protein [Dinoroseobacter shibae DFL 12] MGKARIATGVFLVTLVTGAMGYTIASAVLTYQDLGFGAEIDFAYIAQNYMAILDRRPEDAQLIHLIIGSF AAAGLMLSLALSGSALTRFGQTHWQTAREMKANGFFGAPGTGFILGKLGPPGSRANYICSKVFPHALIVA PTGRGKTTGFVIPNLLTWQGSAVTLDVKGECFEATARHRAAQGDKVYRFAPTDWEGKRTHRYNPLLRIYQ LKDPARQQMELQLLATLFLQSDNDRVQGLLKGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQKEYF ARGHEVDNRAAKLIFTRLASTNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSDFDFRTIRKKPFSVYLV VQPLMVKPLAPLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRTYRGHLAVV TQTIPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVVTRSQSIGKNPFEGRSQST RTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKAIHAAQTGELPFPEPGGGGPQGTLP LSMRAMPMTPPANGPGGSDAVVETTRQEAGSQPSGQTDVALKKTAPVVLAVIAEEQRQMEMDFGGQVADA ETVGVDDEAQLRSAVDGLDDMEAMLQEGDGGEKLVAR |
| Nucleotide Sequence: 2004 bp [Download] |
| >gi|159046135|ref|NC_009955.1|:c57364-55361 Dinoroseobacter shibae DFL 12 plasmid pDSHI01, complete sequence ATGGGAAAAGCGCGGATCGCCACAGGGGTCTTTCTGGTAACGCTGGTGACCGGGGCTATGGGCTATACCA TCGCCTCGGCGGTGCTGACCTACCAGGATCTCGGGTTCGGGGCCGAGATCGACTTTGCCTATATCGCGCA GAACTACATGGCGATCCTCGATCGCCGCCCGGAGGATGCGCAACTTATTCACCTGATCATCGGCAGCTTC GCCGCCGCCGGGCTGATGCTGAGCCTCGCCCTCTCAGGGTCCGCCCTGACACGCTTTGGCCAGACCCATT GGCAGACCGCGCGCGAGATGAAGGCCAATGGGTTCTTCGGGGCGCCCGGCACCGGGTTCATCCTCGGCAA GCTGGGGCCGCCGGGCTCCCGCGCCAATTACATTTGCTCGAAGGTTTTTCCGCATGCGCTGATCGTGGCC CCCACGGGCCGAGGCAAGACCACGGGCTTCGTCATCCCGAACCTGCTGACCTGGCAAGGCTCCGCCGTGA CGCTCGATGTGAAGGGCGAGTGCTTTGAGGCCACGGCCCGGCACCGCGCCGCCCAAGGCGACAAGGTCTA TCGCTTTGCCCCCACCGATTGGGAGGGCAAGCGCACGCATCGTTACAACCCGCTCTTGCGCATCTATCAA CTGAAAGACCCCGCCCGCCAGCAGATGGAATTGCAGCTCCTGGCGACGCTCTTCCTGCAGAGTGACAACG ACCGGGTGCAGGGCCTCCTCAAAGGCGGAATCGATCTCTTCGTGGCGGCAGGCCTGCTGGCCTTCCAGCG CAAGCGCCCCACCTTGGGCGAGATCTACCGCATCGCCGCCTCGGGCGGAAACAAGCAGAAGGAGTATTTC GCGCGGGGCCACGAGGTCGACAACAGGGCCGCCAAGTTGATCTTCACGCGGCTGGCCTCAACCAACAACG ATACGCTGACCTCCTATGTCTCGCTCCTGATGACATCGGGGCTCGATCAATGGCAGAACCCGGCCATCGA TGAGGCGACGGCGGTGTCGGACTTTGATTTCCGGACGATCCGCAAGAAGCCCTTCTCGGTCTATCTGGTG GTCCAGCCGCTGATGGTGAAGCCGCTGGCGCCGCTGATCCGGCTCTTCTTCTCCGATCTTCTCTCCGCCA TGCAGGAAAAGGATCCCGGGCCGGATGAACCCTGGCCCGTGATGATCATGCTCGACGAGTTCAATCGCCT TGGCAAAATGCCCATTGTGGTAGAAAGCATCGAGACCCTGCGCACCTATCGTGGTCACCTCGCCGTGGTC ACCCAAACCATCCCCGCCCTCGATGAAATCTACGGCGAGAACACCCGTCGAGCCCTGCAGGGCAACGCGG GCGTGAAGCTCTATCTGACGCCCTCCGATGAAAAGACCGTCGAGGAGCTGAGCAAAGCGGTCGGCAAGAC CACGAAGACCGTCGTCACGCGCTCGCAGTCCATCGGCAAGAACCCCTTTGAAGGGCGCAGCCAATCCACG CGGACTGAAGAGAGCTCGTTGTTGCCCGAAGATGAGGCGCGCCGCCTGCCGCTCGATGAAATCGTCATGG TCATCGATGCCCAGATGCCGGTCCGTGCAAAGCGGATCCAGTACTTCGATGATCGGCTGTTCAAGGCGAT CCACGCGGCGCAGACAGGGGAGTTGCCGTTTCCGGAGCCGGGGGGAGGGGGGCCGCAAGGCACGCTGCCG CTGAGCATGCGCGCCATGCCGATGACACCGCCCGCGAACGGACCAGGTGGGTCTGACGCCGTTGTGGAGA CCACACGCCAAGAAGCGGGCAGTCAACCGTCAGGGCAAACCGACGTCGCCCTAAAAAAGACCGCGCCCGT CGTTCTAGCCGTTATCGCCGAGGAACAGCGACAGATGGAAATGGATTTTGGGGGCCAGGTTGCGGATGCC GAGACAGTGGGCGTGGATGATGAAGCTCAGTTGCGCTCTGCTGTCGATGGCTTGGACGACATGGAGGCGA TGCTGCAGGAGGGCGATGGCGGTGAAAAGCTGGTTGCTCGATAG |