| Protein ID: 159046183 |
 T4SS name [ID] | VirB [470] |
| Gene symbol | - |
| Locus tag | Dshi_3641 |
| Strain | Dinoroseobacter shibae DFL 12 |
| Replicon | plasmid pDSHI01 [GenBank: NC_009955] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 40348..42723 [+] |
| Product | CagE TrbE VirB component of type IV transporter system |
| Component type | VirB4 |
| UniProt ID | A8LT07 |
| KEGG ID | dsh:Dshi_3641 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | AAA_10 [PF12846], Evalue: 8e-34, Aligned region: 443..711 CagE_TrbE_VirB [PF03135], Evalue: 1.7e-26, Aligned region: 190..383 TrwB_AAD_bind [PF10412], Evalue: 5.9e-06, Aligned region: 443..479 |
| Protein Sequence: 791 a.a. [Download] |
| >gi|159046183|ref|YP_001541855.1| CagE TrbE VirB component of type IV transporter system [Dinoroseobacter shibae DFL 12] MPRDDTRDAALDPRTMTPDWYARETRLAHMLPYVSLVDDQTVRTRVNELFRCIRLEGINSYTMDDAYLDK VTALFARIVAQLGPEFSYYVHKVSKAIKPDLDPIGEDSFAGEVDRRWRAKLETSGLRDKTLTLTVIHRPP PKSLLPHLGRSAPDRLKEETRKRQQRLGEAVNVFLSGLTELKPRLLSAGSGELVGFLGALNTGTELPLYP ANTYGFLSFNVANTRVTFYGDHFELSEGVVGHRYGKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHSFTPI NSNLMAGRIKRQKRQMQASQDAALSLLEALDIAADDLEAKRQSFGEHHMVVTLFCDTLEELQTLSAEIVN AAATEGVKMIGERVAAKAHYLSQHPGNQPKRVRASAVTNRNFADFAAFHRTQLGKPAALTPWGRVVTYLP TPEQSAYRFSYHEQGSPSSEPTSGHTLIMGRPGSGKSVLSAFLMTQARRAGARVFVFDYRLGMEMAVRAN GGRYASLNAGQPTGLNPLWTETDARGTAWLSDWLATLLYRADKPLTPAQTNRIQEVVRQNAQASSPALRN WQDFASLFVSTDDGGDLHQRLLEWTEDGRYGWIFGQSLEDTFSLKGDVVGFDLTGILDSEADKERMAVLS YLFRRVEREIEDRRPTIIVIDEAWKALDNAYFAERLSNWLVTARKQNTVAVMMTQYASQLERTRTGKTII EAVPTQILLPNIRAQPADYAMLNLTEKELDVLLNTGSDSRLALIRDDQGSIVVDADLSALGPNLTIMGGM EKGEALVGADYRDRPDFWRLS |
| Nucleotide Sequence: 2376 bp [Download] |
| >gi|159046135|ref|NC_009955.1|:40348-42723 Dinoroseobacter shibae DFL 12 plasmid pDSHI01, complete sequence ATGCCCCGTGATGACACACGTGATGCTGCGCTCGACCCCCGCACAATGACGCCGGACTGGTACGCGCGCG AGACCCGGCTTGCGCATATGCTGCCCTATGTGAGCCTCGTCGACGACCAGACCGTGCGGACACGGGTGAA CGAACTCTTCCGCTGCATCCGGCTCGAGGGGATCAACAGCTACACGATGGACGATGCCTATCTCGACAAG GTGACGGCGCTTTTTGCCCGCATCGTCGCGCAGCTTGGGCCGGAATTCAGCTATTACGTCCACAAGGTCT CCAAGGCGATCAAACCGGATCTGGACCCAATTGGTGAGGACAGCTTCGCGGGCGAGGTTGACCGGCGTTG GCGCGCGAAACTCGAGACCAGCGGGCTGCGCGACAAGACGCTGACGCTCACCGTCATTCACCGCCCGCCC CCGAAAAGCCTCCTGCCGCATCTCGGCCGCAGCGCGCCGGACCGGCTGAAGGAAGAGACCCGCAAACGCC AGCAGCGCCTCGGTGAGGCCGTGAACGTCTTCCTCTCTGGCCTCACCGAGCTCAAGCCGCGCCTGCTGTC AGCCGGATCGGGAGAGTTGGTGGGATTTTTGGGCGCGCTCAACACGGGCACCGAGCTGCCGCTCTACCCG GCCAACACCTACGGCTTTCTGTCCTTCAACGTCGCCAATACCCGCGTGACGTTTTACGGCGACCATTTCG AGCTTTCCGAGGGCGTCGTGGGCCACCGCTACGGCAAGAGCTTCACCATCGGAGAATACTCGGAAGGCAC CTCCTGCACCATGTTCGACATGCTGAACCTGCCGGTCGACATGATCGTGACGCACTCCTTCACGCCGATC AATTCGAACCTCATGGCGGGCCGCATCAAGCGGCAAAAGCGCCAGATGCAGGCCAGCCAGGACGCAGCCC TCTCGCTCCTGGAAGCCCTGGACATCGCCGCCGATGATCTCGAGGCCAAGCGCCAAAGCTTCGGCGAGCA TCACATGGTCGTGACGCTCTTTTGCGACACGCTCGAAGAACTGCAAACCCTCAGCGCCGAGATCGTGAAC GCCGCCGCGACCGAAGGCGTGAAGATGATTGGCGAGCGGGTCGCGGCCAAGGCGCATTACCTCAGCCAGC ACCCCGGCAACCAGCCAAAGCGCGTCCGCGCCAGCGCCGTCACCAACCGCAACTTCGCGGATTTTGCGGC CTTCCACCGGACACAGCTCGGCAAACCTGCAGCACTTACCCCCTGGGGCCGGGTCGTCACCTATTTGCCC ACGCCGGAGCAGAGCGCCTACCGGTTTTCTTATCACGAGCAGGGCAGCCCTTCCAGCGAACCGACCAGCG GGCATACCCTGATCATGGGACGGCCCGGGTCGGGCAAATCAGTGCTGTCGGCCTTTCTGATGACCCAAGC CCGTCGCGCAGGGGCGCGGGTCTTCGTCTTCGACTACCGTCTCGGTATGGAGATGGCGGTCCGCGCCAAT GGCGGGCGCTACGCGTCCCTGAACGCCGGCCAGCCCACGGGTCTCAATCCGCTCTGGACAGAGACCGATG CGCGCGGCACCGCTTGGCTCTCGGACTGGCTTGCCACGCTGCTCTACCGCGCCGACAAGCCGCTGACCCC TGCGCAGACCAACCGCATCCAGGAAGTGGTGCGCCAAAACGCGCAGGCCTCCAGTCCGGCCCTGCGGAAC TGGCAGGATTTCGCATCGCTTTTTGTGTCCACCGATGATGGCGGCGATCTGCACCAGCGCCTGCTCGAGT GGACCGAAGACGGCCGCTACGGCTGGATCTTCGGGCAGAGCCTCGAGGACACGTTCTCGCTCAAGGGCGA TGTCGTGGGCTTCGATCTGACCGGCATTCTCGACAGCGAGGCCGACAAGGAACGGATGGCGGTCCTGTCC TATCTTTTCCGCCGGGTCGAACGCGAGATCGAGGATCGCCGCCCCACCATCATCGTGATCGACGAGGCAT GGAAGGCCCTCGATAACGCGTATTTCGCCGAGCGGCTGTCGAACTGGCTGGTGACCGCGCGCAAGCAGAA CACGGTTGCCGTGATGATGACGCAATACGCGAGCCAGCTCGAGCGCACCCGGACCGGCAAGACCATCATC GAGGCGGTGCCGACGCAGATCCTGCTGCCCAATATCCGCGCGCAGCCTGCGGACTACGCCATGCTGAACC TAACGGAGAAGGAGCTCGACGTCCTTCTCAACACCGGCAGCGACAGCCGCCTCGCGCTCATCCGCGATGA CCAGGGCTCGATCGTCGTCGATGCCGATCTGAGCGCCCTCGGGCCCAATCTCACCATCATGGGCGGCATG GAGAAAGGCGAGGCGCTCGTCGGCGCTGATTACCGCGACCGCCCGGACTTCTGGAGGCTTTCATGA |