| Protein ID: 159046180 |
 T4SS name [ID] | VirB [470] |
| Gene symbol | - |
| Locus tag | Dshi_3638 |
| Strain | Dinoroseobacter shibae DFL 12 |
| Replicon | plasmid pDSHI01 [GenBank: NC_009955] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 39177..39797 [+] |
| Product | lytic transglycosylase |
| Component type | VirB1 |
| UniProt ID | A8LT04 |
| KEGG ID | dsh:Dshi_3638 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | NA |
| Protein Sequence: 206 a.a. [Download] |
| >gi|159046180|ref|YP_001541852.1| lytic transglycosylase [Dinoroseobacter shibae DFL 12] MVLVMESDGSLTPSRSQDSFARNYHDGIGQGSAADELAIFGSDETVPEREAMRFAARVGPAPLPHPDVLN AIETTALRYASHPGLRRAELSVTDWLSLYRANIEVESAYRQDAVSRAGAIGLGQLMPDTARDLGVDPRDP QQNLDGSARYLAMMLESFGDPHLALAAYNAGPEAVRQHGGIPPYRETQNHVARVMAVVARLEGSNS |
| Nucleotide Sequence: 621 bp [Download] |
| >gi|159046135|ref|NC_009955.1|:39177-39797 Dinoroseobacter shibae DFL 12 plasmid pDSHI01, complete sequence ATGGTACTGGTCATGGAGAGCGATGGCTCTCTGACCCCTTCTCGCTCCCAGGACAGCTTTGCCCGCAATT ACCATGACGGCATCGGCCAGGGATCGGCAGCCGATGAACTTGCGATTTTCGGCAGCGATGAAACTGTGCC AGAGCGTGAAGCGATGCGCTTTGCAGCCCGTGTCGGGCCGGCACCCCTGCCCCACCCCGATGTCCTAAAC GCCATAGAGACCACGGCCCTGCGCTATGCCAGCCACCCCGGCCTAAGGCGCGCGGAGCTTTCCGTCACGG ACTGGCTGAGCCTCTACCGCGCCAATATCGAAGTGGAGAGCGCATATCGGCAGGATGCGGTCTCCCGTGC GGGCGCCATTGGCCTTGGTCAGCTTATGCCCGACACCGCGCGCGACCTCGGCGTCGACCCGCGCGATCCA CAACAGAACCTCGACGGTTCCGCTCGCTACCTTGCGATGATGCTGGAAAGCTTCGGCGATCCGCATCTGG CGCTTGCCGCCTACAACGCTGGGCCGGAAGCCGTGCGCCAACACGGTGGCATTCCCCCTTACCGAGAAAC CCAGAACCACGTGGCCCGCGTCATGGCCGTTGTGGCCCGATTGGAAGGATCAAATTCATGA |
| Protein ID: 159046185 |
| T4SS name [ID] | VirB [470] |
| Gene symbol | - |
| Locus tag | Dshi_3643 |
| Strain | Dinoroseobacter shibae DFL 12 |
| Replicon | plasmid pDSHI01 [GenBank: NC_009955] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 42877..44031 [+] |
| Product | lytic transglycosylase catalytic |
| Component type | VirB1 |
| UniProt ID | A8LT09 |
| KEGG ID | dsh:Dshi_3643 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | NA |
| Protein Sequence: 384 a.a. [Download] |
| >gi|159046185|ref|YP_001541857.1| lytic transglycosylase catalytic [Dinoroseobacter shibae DFL 12] MKCRLRHILALCLLPGAAFSQGVPTNDSGLTARDIVETGDREADLAIQADKLSVRELIAEIEREQLATLQ RILDAQSSFGGQGLPAMVSGLESGSGDPDRAVEAVYGTGEIDPNRGGAQMFGDASENIEQLIIRVAQETS GFAGVGRAGLSPVQWRALLQALIWQESRFTIGARSPVGAFGLTQIMPGTASDLGINPDYYDSPYLQVHGG ARYLATQLNTFDGNIINALAAYNAGPGRVFEYGGVPPFRETQHYVQVIPERYNLYLSRIGGIEALGTIDP ALLANANLSITGHGAAFYGSNSPAAIRQAALRIADIVERISETEDMQESVALNTYARAELVRLVAARIRL QAARTRVLSAEELAQASARMAEGAFMEFTIREID |
| Nucleotide Sequence: 1155 bp [Download] |
| >gi|159046135|ref|NC_009955.1|:42877-44031 Dinoroseobacter shibae DFL 12 plasmid pDSHI01, complete sequence TTGAAGTGTAGGCTGCGTCATATCCTGGCCCTTTGCCTGCTGCCTGGCGCCGCCTTTTCCCAAGGTGTGC CGACCAATGACAGCGGGTTGACCGCGCGCGATATCGTCGAGACCGGCGATCGAGAGGCCGACCTCGCCAT TCAAGCGGACAAGCTCTCGGTGCGAGAACTCATCGCCGAAATCGAACGGGAGCAATTGGCCACCCTGCAG CGCATCCTCGATGCCCAGAGCAGCTTCGGCGGTCAGGGCCTGCCGGCCATGGTCTCCGGGCTGGAAAGTG GCAGCGGCGATCCCGACCGCGCCGTGGAAGCCGTCTATGGCACGGGCGAGATCGATCCCAATCGCGGCGG TGCGCAGATGTTCGGGGATGCGTCTGAGAACATCGAGCAACTCATCATCCGCGTCGCCCAGGAAACCAGC GGCTTTGCCGGCGTTGGCCGCGCGGGCCTCTCCCCGGTTCAATGGCGCGCACTCCTACAGGCGCTCATCT GGCAGGAAAGCCGGTTTACCATCGGCGCGCGCTCGCCGGTCGGCGCCTTTGGCCTCACCCAGATCATGCC TGGGACGGCCAGCGATCTCGGCATCAACCCGGATTACTATGACAGCCCCTACCTGCAGGTGCATGGCGGC GCGCGCTATCTCGCCACCCAGCTCAACACCTTCGATGGCAACATCATCAACGCCCTCGCGGCCTATAATG CCGGCCCCGGCCGGGTCTTTGAATATGGCGGGGTCCCACCTTTCCGCGAAACCCAGCACTACGTCCAGGT CATCCCCGAGCGCTACAATCTCTATCTGAGCCGCATCGGCGGGATCGAAGCGCTCGGAACGATCGATCCG GCGCTTCTGGCCAATGCCAACCTCTCGATCACCGGGCATGGCGCGGCCTTCTATGGCAGCAACTCCCCCG CTGCGATCAGGCAGGCCGCCCTGCGCATTGCGGATATCGTCGAGCGGATTTCTGAGACGGAAGACATGCA GGAAAGCGTCGCGCTCAACACCTATGCCCGCGCCGAACTCGTGCGTCTCGTCGCCGCGCGTATTCGTCTT CAAGCGGCACGGACCCGCGTGCTTTCGGCCGAGGAATTGGCACAGGCCAGCGCCCGCATGGCCGAGGGCG CATTCATGGAATTCACGATCAGGGAGATAGACTGA |