| Protein ID: 150378123 |
 T4SS name [ID] | VirB [17] |
| Gene symbol | - |
| Locus tag | Smed_6159 |
| Strain | Sinorhizobium medicae WSM419 |
| Replicon | plasmid pSMED02 [GenBank: NC_009621] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 1083205..1085574 [-] |
| Product | type IV secretion system protein VirB4 |
| Component type | VirB4 |
| UniProt ID | A6UMA5 |
| KEGG ID | smd:Smed_6159 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | CagE_TrbE_VirB [PF03135], Evalue: 1.6e-62, Aligned region: 173..375 AAA_10 [PF12846], Evalue: 1.7e-24, Aligned region: 429..699 |
| Protein Sequence: 789 a.a. [Download] |
| >gi|150378123|ref|YP_001314718.1| type IV secretion system protein VirB4 [Sinorhizobium medicae WSM419] MFGTNGRNERSGEIYLPYVGHLSDQVVLLEDGSVMAMAHVKGLPFEMEDVAIRNARCRAFNTLLRNIADD SVSICAHLVRHNDVALPPARHFHSGFAGSLSEAYERRVLSGKLFRNDHFLTLVVFPRTAVGKITGRFIKR NNRNENDLANQTRNLEDLWHITSGALDAYGLRRLGLREKDGVIFSEIAEALRLIMTCRATPVPVVSGSLG ASIYTDRVICGKRALEIRTPGDSYVGSLFSFREYPAKTRPGMLNPLLSANFPLVLSQSFSFLTRAQAHAK LSLKSSQMTSSGDKAVSQINELAEAEDALASSEFVMGAHHLSLCVYADDLNSLANRAASARTRLTDAGAV IVQEGIGMEAAYWAQLPGNTKWRTRPGAITSRNFAGLVSFENFPSGKDSGHWGNSVARFRTNGGTPFDYL PHENDVGMTAIFGPVGKGKTTLMTFVLAMLEQSMVGHDGAIVFFDKDRGGELLVRATGGTYLALRRGVPS GLAPLRALDDTSASRDFLREWVTALIESDGRGAISPEENRRLERAIVRQLSFEPAMRSLAGLREFLLHSP SEGAGARLERWCRGNALGWAFDGEVDEVRLHASITGFDMTQILEYEEVCAPAAAYLLHRVGAVVDGRRFV MCCDEFRFYLLNPQFAAVVDKFLLTVRKNNGMLILATQQPEHVLESPLGASLVAQCMTKIFYPSPTADRS AYVGGLKCTEGEYQAVREQMAIGSRKFLLKRESGSVICEFDLGEMREYVAVLSGRANTVRFADQLRARHG DAPGAWVDEFMARYQEVQD |
| Nucleotide Sequence: 2370 bp [Download] |
| >gi|150377168|ref|NC_009621.1|:c1085574-1083205 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence ATGTTCGGCACAAATGGCAGGAACGAGAGGTCTGGTGAGATATATCTACCATATGTCGGCCACCTCAGCG ATCAGGTTGTCCTTCTCGAAGACGGCTCAGTCATGGCTATGGCACACGTCAAAGGTTTGCCCTTCGAAAT GGAAGACGTTGCCATCCGCAATGCACGCTGCCGAGCGTTCAATACGCTCTTACGCAACATTGCCGATGAT AGTGTATCAATATGTGCTCATCTGGTCCGACATAACGACGTGGCGTTGCCCCCGGCGCGGCACTTTCATA GCGGGTTTGCTGGTAGTCTGAGCGAAGCTTATGAGCGGCGTGTGCTGTCCGGAAAACTCTTTCGAAACGA TCATTTCCTCACCTTGGTCGTGTTTCCCCGAACTGCGGTCGGTAAAATCACGGGCCGGTTCATCAAGCGG AACAATAGAAACGAGAACGATTTAGCAAATCAGACGCGGAACCTGGAAGATCTGTGGCACATCACTAGTG GCGCCCTCGACGCCTATGGTCTCCGCCGGCTTGGTCTCCGCGAGAAAGATGGCGTGATTTTCTCGGAAAT CGCGGAGGCGCTCCGACTTATAATGACCTGCCGTGCCACTCCGGTTCCAGTGGTTAGTGGTTCACTGGGC GCTTCGATTTATACCGACCGAGTAATCTGCGGCAAGCGGGCACTGGAGATTCGAACCCCGGGAGATAGCT ACGTTGGCTCATTGTTCTCATTTCGAGAATATCCGGCAAAGACGCGGCCAGGCATGCTCAATCCGCTATT GTCCGCGAATTTCCCGCTCGTGTTGAGCCAAAGTTTCTCCTTCCTCACGCGTGCACAGGCCCATGCCAAA CTCAGCCTCAAGTCCAGTCAAATGACGAGTTCCGGTGACAAGGCCGTCTCCCAAATCAATGAACTCGCCG AGGCAGAGGACGCGTTGGCAAGCAGCGAATTCGTAATGGGCGCGCATCATTTGAGCCTGTGCGTGTATGC CGATGATCTCAATAGCCTTGCCAACCGCGCCGCAAGCGCCCGCACGCGATTGACGGATGCGGGCGCCGTT ATCGTCCAAGAGGGTATTGGTATGGAGGCGGCTTATTGGGCGCAACTTCCGGGGAACACCAAGTGGCGCA CGCGACCCGGGGCGATCACCTCACGCAATTTCGCGGGCCTTGTCTCGTTCGAGAATTTCCCAAGTGGCAA GGATTCCGGCCACTGGGGCAACTCGGTTGCGCGCTTCCGCACCAATGGTGGAACCCCTTTCGACTACCTC CCTCACGAGAATGACGTGGGTATGACGGCAATATTCGGACCCGTCGGAAAAGGCAAAACAACGCTCATGA CCTTTGTCCTTGCGATGCTCGAACAGAGCATGGTTGGACACGATGGTGCGATTGTCTTCTTTGACAAGGA CCGCGGTGGTGAACTGCTGGTACGTGCCACGGGAGGCACGTATCTGGCGTTACGTAGAGGCGTTCCCAGT GGCCTGGCGCCTCTACGGGCCCTGGACGATACGTCGGCCTCCCGAGACTTTCTGCGCGAGTGGGTGACAG CCTTGATCGAGAGCGATGGACGGGGAGCTATTTCGCCGGAAGAGAACCGCCGCCTGGAACGCGCCATCGT CCGGCAGCTTTCATTTGAGCCCGCTATGCGTTCCCTCGCGGGCCTACGCGAATTCCTATTACACAGCCCG TCCGAAGGCGCAGGAGCGCGACTGGAGCGGTGGTGCAGAGGAAACGCGCTCGGTTGGGCCTTCGATGGCG AGGTGGATGAAGTAAGACTGCATGCCTCCATTACCGGCTTCGATATGACACAGATTCTGGAGTACGAAGA GGTTTGCGCGCCGGCGGCCGCATACCTCCTCCATCGCGTGGGCGCTGTTGTGGATGGCCGTCGCTTTGTC ATGTGTTGCGACGAGTTTCGATTTTATTTATTAAACCCTCAGTTCGCTGCAGTTGTAGACAAGTTCTTGC TCACTGTTCGCAAGAATAACGGCATGTTGATACTCGCAACACAGCAGCCTGAGCATGTTCTCGAATCGCC CCTCGGAGCCAGTCTCGTGGCACAATGCATGACAAAAATTTTCTATCCATCTCCGACGGCGGATCGATCA GCCTATGTCGGCGGCTTAAAGTGTACCGAAGGAGAATATCAAGCCGTTCGCGAGCAGATGGCAATCGGGA GCCGCAAATTTCTGCTTAAGCGCGAGAGCGGAAGCGTTATCTGCGAATTCGACCTCGGCGAGATGCGCGA ATATGTCGCCGTGCTATCGGGTCGGGCCAACACGGTGCGTTTTGCCGATCAGCTCCGTGCCAGACACGGG GATGCTCCTGGTGCGTGGGTAGACGAGTTCATGGCCCGTTACCAAGAAGTTCAAGACTGA |