| Protein ID: 148550953 |
 T4SS name [ID] | VirB [29] |
| Gene symbol | - |
| Locus tag | Swit_5000 |
| Strain | Sphingomonas wittichii RW1 |
| Replicon | plasmid pSWIT02 [GenBank: NC_009508] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 116346..118358 [-] |
| Product | TRAG family protein |
| Component type | VirD4 |
| UniProt ID | A5VH50 |
| KEGG ID | swi:Swit_5000 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 4.1e-103, Aligned region: 110..542 TraG-D_C [PF12696], Evalue: 3.4e-27, Aligned region: 388..509 TrwB_AAD_bind [PF10412], Evalue: 5.3e-19, Aligned region: 185..520 |
| Protein Sequence: 670 a.a. [Download] |
| >gi|148550953|ref|YP_001260383.1| TRAG family protein [Sphingomonas wittichii RW1] MTRLSDARPLTRVVIVAGVLAATFLACALCAVLVALVGLNQIGPRMQISAIPAWLWYYRGDPLLHLWLKR GALISGAIAFVILLIILKRGRTLHGEARFARESEIRREHLRSNSGIIVGQKGGRYLVFGGTEHVLLEAPT RAGKGVGVVIPNLLSWADSVVVLDVKRENWDITAGFRARHGQAVYLFDPLDPEGRSARYNPLSFIDRLDD TDVINELQKIGGMLFPAPEKADPFWAEAARAAFVGVGALVAANPALPFTIGEIYRRLTAGDPKVELPKVV EEAQQRGQRLSQACVSALSDFTSASDNTFSGIKQTITSKLNLWLNPYVDAATSETDFDLRQVRRERISIY LGVSPDNIDRIAPVYNLFLQQLIDLNTRELPENGGRVPVLILLDEFARLGKAPVIASAFSYVAGYGLRLL PVIQSRSQPRGIYGVDVTDEIIANCGLEIVFTPKELKVASELSERLGYFTMNVKSKSRTIHGLLANRSIS ESDQRRALMMPQELMQMPKGELLLMRGGIPPVRGRKIEYFRSKRFTSRISDPPKVAPRPIAINAMSSATK LAGEASSSDPLAQALSAKKAALLSDDQATAPTERAEPVMRALTGNELSGFAEITDDMLVLGDMVDLPPPG DEQAAIAFVTAMTARAVLEPVGGGAQSPAFVTERHDHDRE |
| Nucleotide Sequence: 2013 bp [Download] |
| >gi|148550845|ref|NC_009508.1|:c118358-116346 Sphingomonas wittichii RW1 plasmid pSWIT02, complete sequence TTGACCCGCCTGTCGGACGCACGACCGCTCACTAGGGTCGTAATCGTCGCGGGGGTTCTCGCGGCAACCT TTTTGGCATGCGCCCTGTGCGCGGTGCTGGTCGCACTGGTCGGCCTGAACCAGATCGGCCCGCGAATGCA GATCTCGGCGATACCCGCATGGCTCTGGTATTATCGCGGCGATCCGCTGCTTCATCTGTGGCTGAAGCGA GGCGCGCTGATCAGCGGCGCGATCGCTTTCGTCATCCTGCTCATCATCCTGAAGCGAGGGCGCACGCTCC ACGGCGAAGCCAGGTTCGCGCGTGAAAGTGAAATCCGCCGCGAACATCTGCGCAGCAACAGCGGGATCAT CGTCGGACAGAAAGGCGGCCGCTATCTCGTTTTCGGCGGCACCGAACATGTCTTGCTCGAGGCGCCGACG CGCGCCGGCAAGGGCGTCGGCGTTGTGATCCCCAATCTCCTGAGCTGGGCAGACTCGGTGGTGGTGCTCG ACGTGAAGCGCGAGAATTGGGACATCACCGCTGGTTTTCGCGCGCGGCATGGCCAGGCGGTCTATCTGTT CGATCCGCTGGATCCTGAAGGGCGAAGCGCCCGCTACAATCCCTTGAGTTTCATCGACCGGCTCGACGAC ACCGATGTGATCAATGAACTCCAGAAGATCGGCGGCATGCTGTTTCCGGCCCCGGAAAAGGCTGATCCGT TCTGGGCGGAAGCGGCGCGCGCCGCCTTTGTCGGCGTCGGCGCCCTTGTCGCAGCCAACCCCGCCCTCCC CTTCACGATCGGCGAAATCTATCGGCGGCTGACAGCGGGCGATCCGAAGGTCGAACTCCCCAAGGTCGTC GAGGAGGCGCAGCAGCGCGGGCAGCGGCTGAGCCAGGCGTGTGTGTCGGCGCTGAGCGACTTCACCTCCG CGTCCGACAACACCTTCTCCGGCATCAAACAGACGATCACCTCGAAGCTCAATCTGTGGCTCAACCCCTA TGTCGATGCTGCGACATCGGAGACAGATTTTGATCTGCGGCAGGTCCGGCGCGAGCGGATATCGATCTAT CTTGGGGTGTCGCCCGACAATATCGACCGGATCGCGCCCGTCTATAACCTCTTCCTCCAGCAGCTGATCG ATCTCAATACGCGGGAACTGCCCGAGAATGGCGGCCGCGTGCCGGTGCTCATTTTGCTCGACGAGTTCGC CCGCCTCGGCAAGGCGCCGGTCATCGCCTCGGCCTTTTCTTATGTCGCAGGCTACGGGCTTCGCCTGTTG CCAGTCATACAGAGCCGTTCCCAGCCCCGCGGGATCTATGGCGTGGACGTCACCGACGAGATCATCGCCA ATTGCGGCCTGGAGATCGTATTTACACCCAAGGAGCTGAAGGTCGCCAGCGAACTCTCCGAGCGGCTTGG CTATTTCACGATGAACGTCAAATCGAAGAGCCGCACGATTCATGGCCTGCTCGCCAATCGCAGCATCTCG GAATCAGACCAGCGCCGTGCGCTGATGATGCCGCAGGAACTGATGCAGATGCCCAAGGGCGAGCTTCTGC TCATGCGCGGAGGCATTCCACCCGTCAGGGGCCGCAAGATCGAGTATTTCCGCTCGAAACGCTTCACGAG CCGGATCAGTGACCCACCCAAGGTCGCGCCCCGTCCGATCGCGATCAACGCCATGTCGTCGGCCACCAAA TTGGCAGGCGAGGCGAGCAGCAGTGATCCTTTGGCGCAGGCCCTTAGCGCGAAGAAGGCCGCCTTGTTGA GCGACGATCAGGCGACCGCGCCGACAGAACGGGCGGAACCTGTCATGCGCGCGCTCACCGGTAACGAACT CTCGGGCTTTGCCGAAATCACCGATGACATGTTGGTGCTGGGCGACATGGTGGATCTACCACCGCCCGGT GACGAACAGGCAGCTATCGCCTTTGTCACGGCGATGACGGCCCGGGCCGTTCTCGAGCCCGTGGGTGGAG GCGCCCAATCTCCAGCATTTGTGACCGAAAGGCATGACCATGACAGAGAATGA |