| Protein ID: 148550807 |
 T4SS name [ID] | Tra_F [524] |
| Gene symbol | - |
| Locus tag | Swit_5371 |
| Strain | Sphingomonas wittichii RW1 |
| Replicon | plasmid pSWIT01 [GenBank: NC_009507] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 277418..280012 [+] |
| Product | Type-IV secretion system protein TraC |
| Component type | TraC_F |
| UniProt ID | A5VGR3 |
| KEGG ID | swi:Swit_5371 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TraC_F_IV [PF11130], Evalue: 1.3e-64, Aligned region: 31..278 AAA_10 [PF12846], Evalue: 1.1e-51, Aligned region: 476..761 FtsK_SpoIIIE [PF01580], Evalue: 1.1e-05, Aligned region: 459..511 DUF87 [PF01935], Evalue: 5.2e-05, Aligned region: 478..511 |
| Protein Sequence: 864 a.a. [Download] |
| >gi|148550807|ref|YP_001260246.1| Type-IV secretion system protein TraC [Sphingomonas wittichii RW1] MAKGGFFDSMLSGLFGDAARPDDDRPALGVPMLAHWLPYRSYDPKTGIFYNSASRGFVIEAAPMVGADER TAEIITQFLSEGIPAPGCIQFHQWMSPRVGEALSKWYLPRYAARGVYERMAKHRVDFLSDGVWQSLSKDA PFCLRHHRVAISYSTPESSSVSDDDIVSVMEGLVSALASVGITTRRMDPVALIAWIDDITSPTTAAGEDV VSYNPFDPIADQAIRRDIELRVEPDRMLLRTERFRPTGKVHEGAPEIGEIYPDVFDVRSFSVRNLPNRWA PWDMAKLVGDMFTDKLRMPCPVATNLCVEYPDTQASSNKASFKFMRTTSLADSKSARFLPQLRDQSQEWR FVNDEIRQGRKLVRVFFSVTSFSPKGRGDANERVLKSVYRAAGWDLLDDRYLQVMGLLCAMPMTMANGLS RDLERMKRMRTLLTTTAANLAPLQGEYLGGHVPHLLMVGRRGQPFFWSPFENAAGNHNVAVFGKSGSGKS VALQELCASLCGAGAKVVVIDDGRSFEHSAKLQGGAFVEFTMSSGFCLNPFSMIDEAQAAEDEDYLLDCM AMLKAIVNQMSRHIDRLNDTERGLIDGAVNTVWEAHGRRGSIDLVIEALDATGNALAHDLGIAMRPFSAA GTYGRFFQGEVSFELKAQLTVFELSDLSAREELRSVVLTAIMFMSQQVMRKVDRAIPKALLLDEAWQLLR GGAMADFIETYARTCRKYGASLVTATQSLNDYYKSAGSIAALENSDWFVILQQKPETIADFKKHDRFEMD DYTDALLRSLKRNGFEYSDIMIKGPETLAVGRLVLDPYSATLFSSSPQTFARIEALIGEGLSMDEAIERI AFPDNPEKWAANAESDPDVAIAAE |
| Nucleotide Sequence: 2595 bp [Download] |
| >gi|148550551|ref|NC_009507.1|:277418-280012 Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence ATGGCGAAAGGCGGCTTTTTCGACAGCATGCTTTCGGGGCTCTTCGGCGATGCCGCGCGCCCTGATGATG ACCGGCCCGCGCTTGGCGTTCCCATGCTGGCGCACTGGCTGCCCTATCGCAGCTACGATCCCAAGACGGG GATCTTCTACAACAGCGCCTCGCGCGGATTCGTGATCGAGGCCGCTCCGATGGTGGGCGCGGACGAGCGC ACCGCGGAGATCATCACGCAGTTCCTGTCCGAAGGCATTCCCGCGCCGGGCTGCATCCAGTTCCATCAGT GGATGAGCCCGCGCGTGGGGGAGGCGCTGAGCAAATGGTATCTGCCGCGCTATGCCGCACGCGGCGTCTA CGAACGGATGGCCAAGCACCGGGTCGATTTCCTCAGCGACGGCGTATGGCAGTCGCTCTCGAAGGACGCG CCCTTTTGCCTGCGCCATCACCGCGTGGCGATCTCCTATTCGACGCCCGAGAGCTCGTCGGTGTCCGATG ACGACATCGTCTCGGTCATGGAGGGGCTCGTCTCCGCGCTGGCTTCGGTGGGGATCACGACCCGGCGCAT GGATCCGGTCGCGCTGATCGCCTGGATCGACGACATCACTTCACCGACCACGGCTGCCGGTGAGGACGTC GTCAGCTACAATCCCTTCGATCCAATCGCCGACCAGGCCATTCGCCGCGACATCGAGCTCCGGGTCGAAC CCGACCGGATGCTGCTGCGCACCGAGCGGTTCCGACCGACCGGCAAGGTCCACGAAGGCGCCCCGGAGAT CGGCGAGATCTATCCCGATGTCTTTGACGTGCGCTCCTTCTCGGTGCGCAACCTGCCCAATCGCTGGGCG CCCTGGGACATGGCGAAGCTGGTGGGCGACATGTTCACTGACAAGCTGCGCATGCCGTGCCCGGTCGCGA CGAACCTGTGCGTTGAATATCCGGACACCCAGGCCTCGTCGAACAAGGCGAGCTTCAAGTTCATGCGGAC GACGAGTCTCGCCGATTCCAAGTCCGCGCGTTTCCTGCCGCAGCTGCGCGACCAGAGCCAGGAGTGGCGG TTCGTCAACGACGAGATCCGGCAGGGCCGCAAACTTGTGCGGGTATTCTTTTCCGTCACCTCCTTCTCGC CCAAGGGACGCGGCGACGCCAACGAACGTGTGCTCAAATCCGTCTACCGCGCGGCGGGCTGGGACCTGCT CGACGACCGCTACCTGCAGGTGATGGGCCTGCTCTGCGCCATGCCCATGACGATGGCCAACGGCCTGTCG CGCGATCTCGAGCGGATGAAGCGCATGCGCACGCTGCTCACCACCACCGCCGCCAATCTCGCGCCGCTGC AGGGCGAATATCTAGGCGGCCATGTGCCGCATCTCCTGATGGTGGGACGGCGCGGCCAGCCCTTCTTCTG GTCACCCTTCGAAAACGCGGCGGGCAACCATAATGTCGCGGTCTTCGGCAAATCGGGATCGGGCAAGTCG GTGGCCTTGCAGGAGCTGTGCGCCTCGCTGTGCGGCGCTGGCGCAAAGGTGGTCGTGATCGACGACGGGC GATCGTTCGAGCATTCGGCCAAATTGCAGGGCGGCGCCTTCGTCGAATTCACCATGAGCTCGGGCTTCTG CCTTAATCCCTTCTCGATGATCGACGAGGCCCAGGCGGCTGAGGACGAGGACTATCTGCTCGACTGCATG GCGATGCTCAAGGCCATCGTGAACCAGATGTCGCGCCACATCGACCGTCTCAACGATACCGAGCGCGGCC TCATCGATGGCGCGGTCAACACGGTGTGGGAGGCACACGGCCGAAGAGGATCGATCGACCTTGTGATCGA GGCGCTCGATGCAACCGGCAACGCGCTCGCGCACGACCTCGGTATTGCGATGCGCCCCTTCTCGGCGGCG GGCACCTATGGCCGGTTCTTCCAGGGGGAGGTCAGCTTCGAACTGAAGGCGCAGCTCACGGTCTTCGAGC TCTCGGATCTCTCCGCGCGCGAAGAACTGCGCAGCGTGGTCCTCACCGCCATCATGTTCATGTCGCAGCA GGTGATGCGCAAGGTCGATCGCGCAATCCCCAAGGCACTGCTGCTGGATGAAGCCTGGCAGCTGCTGCGC GGCGGGGCTATGGCCGACTTCATCGAGACCTATGCGCGCACCTGCCGCAAATATGGCGCTTCGCTCGTCA CCGCCACGCAGTCGCTCAACGATTATTACAAGTCGGCGGGTTCGATCGCGGCGCTGGAGAACAGCGACTG GTTCGTCATCCTGCAGCAGAAGCCGGAAACGATCGCCGACTTCAAGAAGCATGATCGCTTCGAGATGGAC GATTATACCGATGCGCTGCTGCGCTCCTTGAAGCGTAACGGCTTCGAATATTCGGACATCATGATCAAGG GACCCGAGACGCTGGCGGTTGGTCGCCTGGTTCTGGATCCCTATTCAGCCACATTGTTTTCCTCGAGCCC GCAGACCTTCGCCCGGATCGAGGCGCTGATCGGAGAGGGTCTCAGCATGGACGAGGCGATCGAGCGCATC GCCTTTCCCGACAACCCCGAGAAATGGGCGGCGAACGCGGAGAGTGATCCCGACGTCGCAATCGCCGCGG AGTAG |