| Protein ID: 148550660 |
 T4SS name [ID] | Tra_F [524] |
| Gene symbol | - |
| Locus tag | Swit_5223 |
| Strain | Sphingomonas wittichii RW1 |
| Replicon | plasmid pSWIT01 [GenBank: NC_009507] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 113404..116436 [-] |
| Product | conjugative relaxase region-like protein |
| Component type | TraI_F |
| UniProt ID | A5VGB6 |
| KEGG ID | swi:Swit_5223 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwC [PF08751], Evalue: 8.9e-80, Aligned region: 7..283 AAA_30 [PF13604], Evalue: 4.8e-45, Aligned region: 457..649 Viral_helicase1 [PF01443], Evalue: 3.8e-08, Aligned region: 478..605 UvrD_C_2 [PF13538], Evalue: 1.8e-06, Aligned region: 800..904 |
| Protein Sequence: 1010 a.a. [Download] |
| >gi|148550660|ref|YP_001260099.1| conjugative relaxase region-like protein [Sphingomonas wittichii RW1] MLSVASVRSASGAANYFAKDDYYTVEGSSEISAWGGEGAGALGLSGEVGKDAFEGMLNGILPSGEGVAQV ENRRAGLDLTFSMPKSASILAYVAGDKRILAANMAAVQKTMAWVEKNLAEGRKDIGGRTVPVATGNLVYA LFQHDTSRALDPQGHIHAVIANLTRLPDGKWQALHADKIWSHNTVIGSIYHAYLREGIEQLGFRIEALGK HGTFEIAGVPRKVIDAYSQRREAILEKAAALGIVSHKGRDQITTNTRDPKLNVKDRDALKQEWIDKAASL GFDGKALVEGALARSDRHGALGPLERGYKAVTEAIAAGREKLGDLVRPADPLVDRGLARVTQSPAIARAQ LAVASAVRIHSEREAAFPIHRLAKTALDLGLKDVTIDRIEQRIQQLVARGTLLRGQERAADFVTTRQALA TETQILTQVEAGRGQANPIIDASEAPGRLQAAATQPLNTGQLAAATLILGSADRTVSIQGIAGAGKSTML QAVARVAEAEGRAITGLAFQNKMVADLAEGAGVPAQTIASFVLAHERYVAEPQGPGYDAARAAHAGSMLV VDETSMVSSNDMLKLHAIVETLGVDKLVLVGDRQQLSSIDAGKSFAMIQAAGGTLARMDENIRQRTDVLR TVAALANIGKASEAMRVLGDKVIEASQPAEHAADLWLALDPAERQATAVFASGREARAAINERIQAGLAA EGSLEGEGIHLTVYERVNTTREELRYAATYRAGMTLEVGRGGGQDIGLRAGRYDVLAVHANGKVELGEGR RRIRFDPLKLSPTETRDRLQLTEKKDLHLRAGDRIRWTANDKPRGLTNASLARVVAVDRDSVTVETAGRD RLVLAFGDPMLSRVDLAYALNMHMAQGITTDKAITVMDSHERNLSNQRLFNVGVTRVRDDLTMVVDDKAK LERQLDHNPGNKTSALETLGRLEIDGPGRAQASGPFDPGPVEGGPGPKAAEGLDGFPPVPPAEGQVAARA KSDDLSAPRLKPEQADLLPPLPERSLGLDL |
| Nucleotide Sequence: 3033 bp [Download] |
| >gi|148550551|ref|NC_009507.1|:c116436-113404 Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence ATGCTGTCGGTCGCCTCGGTCCGCTCGGCTTCGGGCGCCGCGAATTATTTCGCGAAGGACGACTATTACA CCGTCGAAGGATCCTCCGAGATCAGCGCCTGGGGCGGGGAGGGCGCGGGGGCGCTCGGGCTGTCGGGAGA AGTGGGTAAGGATGCGTTCGAGGGCATGCTCAACGGCATCCTGCCTTCGGGAGAAGGGGTGGCTCAAGTA GAGAACCGCCGGGCCGGCCTCGACCTCACCTTCTCCATGCCCAAGTCAGCCTCGATCCTGGCCTATGTGG CGGGCGACAAGCGCATTCTCGCCGCCAACATGGCGGCGGTCCAGAAGACGATGGCCTGGGTCGAGAAAAA CCTCGCCGAAGGTCGCAAGGATATCGGCGGGCGAACCGTCCCTGTCGCGACCGGCAACCTCGTCTATGCC CTCTTCCAGCACGACACGAGCCGTGCCCTCGATCCCCAGGGGCATATCCATGCAGTGATCGCCAACCTGA CCCGTCTGCCCGACGGCAAATGGCAAGCGCTCCACGCGGACAAGATCTGGAGCCACAACACCGTCATCGG CTCGATCTACCACGCCTATCTGCGCGAAGGCATCGAGCAGCTCGGTTTCAGGATCGAGGCGCTCGGCAAG CACGGCACCTTCGAGATCGCCGGCGTACCGCGCAAGGTGATTGATGCCTACAGCCAGCGCCGCGAAGCGA TCCTCGAAAAGGCGGCGGCGCTTGGCATCGTCTCGCACAAGGGCCGCGACCAGATCACCACCAATACCCG CGATCCCAAGCTCAATGTCAAGGATCGCGACGCCCTCAAGCAGGAATGGATCGACAAGGCGGCGTCGCTC GGATTCGACGGAAAGGCCCTCGTCGAGGGCGCCCTGGCGCGGTCCGATCGCCATGGGGCGCTCGGACCGC TCGAACGCGGCTACAAGGCGGTGACCGAGGCGATCGCCGCCGGGCGCGAAAAGCTCGGCGACCTTGTCCG GCCCGCGGATCCTTTGGTCGATCGCGGCCTTGCCCGCGTCACCCAGTCGCCCGCCATCGCGCGGGCCCAG CTCGCGGTCGCCTCGGCAGTCCGTATTCATAGCGAACGCGAGGCGGCCTTTCCCATCCATCGCCTTGCCA AGACCGCGCTCGACCTTGGCCTCAAGGACGTGACGATCGATCGGATCGAACAGCGGATCCAGCAACTCGT CGCGCGCGGCACGCTGCTCAGGGGACAGGAGCGCGCAGCTGACTTCGTCACCACCCGGCAGGCACTAGCC ACGGAAACCCAGATCCTGACCCAGGTAGAGGCGGGCCGCGGACAGGCGAACCCAATCATCGACGCGTCCG AGGCGCCGGGCCGCCTGCAGGCCGCAGCGACGCAGCCCCTCAATACAGGCCAGCTCGCCGCCGCTACCTT GATCCTCGGCTCGGCCGACCGCACGGTCTCGATCCAGGGCATCGCCGGCGCCGGCAAGTCGACGATGCTT CAGGCCGTCGCCCGCGTGGCGGAGGCGGAAGGACGCGCCATCACCGGCCTTGCCTTCCAGAACAAGATGG TCGCCGACCTGGCCGAAGGCGCAGGCGTCCCTGCGCAAACCATCGCCTCTTTCGTGCTTGCCCATGAACG GTATGTCGCCGAACCGCAGGGCCCGGGCTATGATGCGGCGCGGGCGGCACATGCCGGATCGATGCTGGTC GTCGACGAGACCTCGATGGTGTCGTCGAACGATATGCTCAAGCTGCACGCCATCGTCGAGACGCTTGGCG TCGACAAGCTCGTGCTGGTTGGTGACCGGCAGCAGCTCTCCTCGATCGATGCGGGCAAATCCTTCGCCAT GATCCAGGCGGCGGGCGGCACGCTGGCGCGCATGGACGAGAATATCCGCCAGCGGACCGACGTCCTGCGC ACCGTCGCCGCGCTTGCCAATATCGGCAAGGCAAGCGAGGCGATGCGGGTGCTGGGCGACAAGGTCATCG AAGCCTCCCAGCCCGCAGAACATGCCGCCGATCTCTGGCTGGCGCTCGATCCCGCGGAGCGCCAGGCGAC CGCGGTCTTTGCCTCGGGACGCGAGGCACGTGCGGCGATCAACGAGAGGATCCAGGCGGGTCTTGCCGCC GAAGGATCGCTGGAAGGGGAGGGCATCCATCTCACGGTCTATGAGCGGGTCAACACGACGCGCGAGGAAC TGCGCTACGCGGCCACCTACCGCGCCGGCATGACGCTCGAGGTCGGTCGGGGCGGCGGCCAGGACATAGG GCTCCGCGCCGGGCGCTACGACGTCCTGGCTGTCCACGCCAATGGCAAGGTCGAGCTGGGCGAAGGCCGC CGCCGTATACGTTTCGATCCGCTGAAATTGTCGCCGACCGAGACACGCGATCGCCTCCAGCTGACCGAGA AGAAGGATCTCCACTTGCGGGCCGGTGACCGCATACGCTGGACGGCCAACGACAAGCCGCGCGGCCTGAC CAACGCCTCGCTCGCCCGGGTTGTCGCCGTCGATCGCGACAGCGTGACAGTCGAGACGGCGGGGAGGGAC CGGCTCGTGCTCGCGTTTGGCGATCCCATGCTGAGCCGGGTGGACCTGGCCTATGCGCTCAACATGCACA TGGCGCAGGGGATCACCACCGACAAGGCGATCACGGTCATGGATAGCCATGAGCGCAACCTGTCGAACCA GCGCCTCTTCAACGTCGGCGTCACCCGCGTGCGCGACGACCTCACCATGGTGGTCGACGACAAGGCGAAG CTCGAGCGGCAACTCGACCACAACCCCGGGAACAAGACCTCTGCGCTCGAGACCCTGGGCCGGCTCGAAA TCGACGGTCCGGGAAGGGCGCAGGCATCCGGCCCATTCGATCCGGGACCTGTCGAAGGCGGACCTGGTCC CAAAGCGGCCGAAGGACTCGATGGCTTTCCGCCGGTGCCCCCGGCCGAAGGGCAGGTGGCCGCCAGGGCG AAGTCTGATGATCTGAGCGCGCCGCGCCTCAAGCCCGAACAAGCCGATCTGCTGCCCCCGCTGCCCGAAC GCAGTCTGGGCCTCGATTTGTAA |