| Protein ID: 146275589 |
 T4SS name [ID] | Tra_F [528] |
| Gene symbol | - |
| Locus tag | Saro_3982 |
| Strain | Novosphingobium aromaticivorans DSM 12444 |
| Replicon | plasmid pNL1 [GenBank: NC_009426] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 147458..149788 [+] |
| Product | Type IV secretory pathway VirD4 components-like protein |
| Component type | TraD_F |
| UniProt ID | A4XE63 |
| KEGG ID | nar:Saro_3982 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 1.3e-141, Aligned region: 226..610 T4SS-DNA_transf [PF02534], Evalue: 3.6e-21, Aligned region: 237..396 T4SS-DNA_transf [PF02534], Evalue: 3.6e-21, Aligned region: 431..595 TraG-D_C [PF12696], Evalue: 2.9e-19, Aligned region: 470..591 AAA_10 [PF12846], Evalue: 5.5e-13, Aligned region: 240..282 AAA_10 [PF12846], Evalue: 5.5e-13, Aligned region: 443..546 |
| Protein Sequence: 776 a.a. [Download] |
| >gi|146275589|ref|YP_001165750.1| Type IV secretory pathway VirD4 components-like protein [Novosphingobium aromaticivorans DSM 12444] MRRPDTWSDQARPGQLKHHSARGNMPRNAGNFTRGSQLITHEFLMWFSSAKMPLLVWFFTFLIALSIVLA LLLHEHEVQMILMRIYAEGWSFMEFSPRKILNLTLPSGRVIPAPVSMIASHPDVVIAWNKLMRAIWGSLF ISLFVAVPLSVWFIDLSRKRGKAILEERHQRGAMLVDAKELAAVINQHNSAALAQEIAERMPGKTMDDVM KMSFAERKAAGIHHVYNIAGVSFPWRSEQAHTIMIGSTGTGKTTQMRDMIAQMRVRQDRAVVFDLTGAYV EAFYNPETDTILNPMDERCPSWSLFDEGKNYADFTAIASAILPTDGGGSDPFWMLGARTLFVQTCVQLMK LGQATNAALAYRLMMADLEEVHELLRNTIAEPLTAPVAARMAESVRAVLNTNAQALLFIPEGKEPFSICD WIRHQDKPGSILFITSSHNELVLNRALLSLWMNLAVHTLMRLPRTRSLRTWFFFDEVHALHRLPAIEDGL QTARGFGGAFVLGIHSFAKLAETYGKEGAQNLASLARTKLILAAADRDTAEHCSDYIGHREVRMMDEAYS YGYSNIRDAATITPRSEVQPLVIPDDIMRLPSLRGFLVFPEGFDAARIRLTYKDYPKVAEGYILRENVEP IEFISMPKGDDEVAETGGRDRSGEPELEPRGEDLGRDPAVPLSPALEPDANAPEIMPDGPNPDPSVGKQM AFRLEQAPQNERTNSREQDPSQKAEKSSASKPAAQRTVGSRELNDPAIPDKESERGAKTAKGIEDQSHSR DDGPEL |
| Nucleotide Sequence: 2331 bp [Download] |
| >gi|146275443|ref|NC_009426.1|:147458-149788 Novosphingobium aromaticivorans DSM 12444 plasmid pNL1, complete sequence ATGCGTCGTCCTGACACCTGGTCCGATCAGGCCCGCCCCGGCCAGCTCAAGCACCATTCGGCGCGCGGGA ACATGCCGCGCAACGCGGGCAATTTCACTCGCGGCTCGCAGCTCATCACGCACGAATTCCTGATGTGGTT TTCCTCGGCGAAGATGCCGCTGCTGGTGTGGTTCTTCACGTTCCTGATCGCGCTCTCGATCGTCCTCGCG CTGCTGCTTCACGAGCATGAAGTGCAGATGATCCTGATGCGGATCTATGCGGAGGGATGGAGCTTCATGG AGTTCAGCCCGCGCAAGATCCTCAACCTAACCTTGCCCTCCGGCCGCGTGATCCCTGCCCCCGTTTCGAT GATCGCCAGCCACCCTGATGTCGTCATCGCCTGGAACAAGCTGATGCGCGCAATTTGGGGTTCGCTGTTC ATCTCGCTGTTCGTCGCGGTGCCGCTTTCGGTCTGGTTCATCGACCTCTCGCGCAAGCGCGGCAAGGCGA TCCTCGAAGAACGCCACCAGCGCGGCGCGATGCTGGTCGACGCCAAGGAGCTTGCCGCCGTGATCAACCA GCACAACAGCGCCGCGCTTGCCCAGGAGATTGCCGAACGGATGCCCGGCAAGACCATGGACGACGTCATG AAAATGAGCTTTGCCGAGCGCAAGGCCGCCGGCATCCACCACGTCTACAACATCGCCGGCGTATCGTTTC CGTGGCGGAGCGAACAGGCTCACACGATCATGATCGGGTCGACCGGGACCGGCAAGACCACGCAGATGCG GGACATGATCGCGCAGATGCGCGTGCGCCAGGATCGGGCGGTCGTGTTCGATCTTACCGGGGCCTACGTC GAGGCGTTCTATAACCCCGAGACCGACACGATCCTCAACCCGATGGACGAGCGCTGCCCGAGCTGGTCGC TGTTCGACGAGGGCAAGAACTACGCCGACTTCACCGCGATCGCATCAGCCATCTTGCCGACCGACGGCGG CGGCTCGGACCCCTTCTGGATGCTGGGAGCAAGGACATTGTTTGTGCAGACCTGCGTCCAGCTCATGAAG CTCGGCCAGGCGACCAACGCCGCACTCGCCTACCGGCTGATGATGGCCGACCTTGAAGAGGTCCACGAAC TGCTTCGCAATACCATTGCCGAGCCGCTGACCGCGCCAGTCGCGGCGCGCATGGCCGAGTCTGTCCGTGC AGTTCTCAACACCAATGCCCAGGCCTTGTTGTTTATTCCCGAAGGCAAGGAACCCTTCTCGATTTGCGAC TGGATTCGCCACCAGGACAAGCCGGGCTCGATCCTGTTCATTACCTCTTCGCATAACGAACTGGTGCTCA ACCGGGCGCTCTTGTCGCTGTGGATGAACCTTGCGGTGCATACCCTGATGCGGCTGCCGCGCACCCGGTC ATTGCGCACCTGGTTCTTCTTCGACGAAGTCCATGCGCTGCACCGCCTGCCAGCGATCGAAGACGGCTTG CAGACTGCGCGCGGCTTTGGCGGCGCCTTCGTGCTCGGCATCCATTCCTTCGCCAAGCTAGCCGAGACCT ATGGCAAGGAAGGCGCGCAGAACCTTGCCTCGCTGGCCCGCACCAAGCTGATCCTGGCAGCGGCCGATCG CGACACCGCCGAGCACTGCTCGGACTACATTGGTCACCGCGAAGTGCGGATGATGGATGAGGCCTACAGC TACGGCTATTCCAACATCCGCGACGCCGCGACCATTACCCCGCGCTCGGAAGTGCAGCCGCTGGTGATCC CCGATGACATCATGCGCCTGCCTTCGCTGCGCGGGTTCCTGGTCTTTCCGGAAGGGTTCGATGCGGCGCG GATCAGGCTCACCTACAAGGACTACCCCAAGGTCGCAGAGGGCTACATTCTGCGCGAGAACGTCGAGCCT ATCGAGTTCATCTCCATGCCCAAGGGTGACGATGAAGTCGCCGAGACCGGCGGCCGGGACCGCAGCGGCG AACCGGAACTGGAGCCGCGCGGCGAAGACCTTGGGCGCGACCCCGCAGTGCCGTTGTCACCGGCGCTCGA GCCCGACGCCAATGCGCCGGAAATCATGCCCGATGGACCAAATCCTGATCCCAGTGTCGGCAAGCAGATG GCATTTCGTCTGGAGCAAGCGCCTCAGAACGAACGCACCAATAGCCGCGAGCAGGACCCGAGTCAGAAGG CTGAAAAGAGTTCCGCGTCCAAGCCTGCCGCGCAGCGCACCGTCGGGTCCCGCGAACTCAATGACCCCGC CATCCCCGACAAGGAATCTGAGCGCGGCGCGAAGACCGCCAAGGGGATCGAGGACCAATCGCATTCCCGT GACGACGGACCGGAGCTCTAG |