| Protein ID: 10954978 |
 T4SS name [ID] | VirB [6] |
| Gene symbol | tiorf158 |
| Locus tag | pTi-SAKURA_p160 |
| Strain | Agrobacterium tumefaciens plasmid pTi-SAKURA (NC_002147) |
| Replicon | plasmid pTi-SAKURA [GenBank: NC_002147] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 156655..158661 [+] |
| Product | type IV secretion system protein VirD4 |
| Component type | VirD4 |
| UniProt ID | Q9R6B7 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 9e-160, Aligned region: 97..537 TraG-D_C [PF12696], Evalue: 5.8e-28, Aligned region: 391..509 TrwB_AAD_bind [PF10412], Evalue: 1.1e-23, Aligned region: 138..522 AAA_10 [PF12846], Evalue: 4.8e-08, Aligned region: 140..467 |
| Protein Sequence: 668 a.a. [Download] |
| >gi|10954978|ref|NP_053398.1| hypothetical protein pTi-SAKURA_p160 [Agrobacterium tumefaciens] MNSSKTTPQRLAVSIVCSLAAGFCAASLYVTFRHGFNGEAMMTFSVFAFWYETPLYMGHATPVFYCGLAI VVSTSIVVLLSQLIISFRNHEHHGTARWAGFGEMRHAGYLQRYNGIKGPIFGKTCGPRWFGSYLTNGEQP HSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFELTSRARKAGGDAVFKFSPLDPERRTHCYNPV LDIAALPPERQFTETRRLAANLITAKGKGAEGFIDGARDLFVAGILTCIERGTPTIGAVYDLFAQPGEKY KLFADLAEESRNKEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYDLRRKRTC VYLCVSPNDLEVVAPLMRLLFQQVVSILQRSLPGKDERHEVLFLLDEFKHLGKLEAIETAITTIAGYKGR FMFIIQSLSALTGTYDDAGKQNFLSNTGVQVFMATADDETPTYISKAIGDYTFKARSTSYSQARMFDHNI QISDQGAPLLRPEQVRLLDDNNEIVLIKGHPPLKLRKVRYYSDRMLRRLFECQIGALPEPASLMLSEGVH RDGQDLSQQAAVTEAQGLGDIDSIPNNMEAATPQNSEMDDEQDSLPTGIDVPQGLIESDEVKEDAGGVVP DFGVSAEMAPAMIAQQQLLEQIIALQQRYGPASSHSVK |
| Nucleotide Sequence: 2007 bp [Download] |
| >gi|10954820|ref|NC_002147.1|:156655-158661 Agrobacterium tumefaciens MAFF301001 plasmid pTi-SAKURA, complete sequence ATGAATTCGAGCAAGACTACGCCCCAGCGTTTAGCTGTCAGCATCGTATGTTCGCTGGCAGCCGGTTTTT GCGCGGCAAGTCTCTATGTAACATTTCGCCATGGTTTCAATGGCGAAGCGATGATGACGTTTAGCGTCTT CGCCTTTTGGTACGAGACCCCGCTCTATATGGGTCATGCGACCCCCGTCTTCTATTGCGGTTTAGCCATT GTCGTCTCGACGTCTATTGTTGTGCTGTTAAGCCAACTTATCATATCGTTTCGCAATCACGAGCATCATG GCACGGCTCGTTGGGCGGGATTTGGCGAAATGCGGCACGCCGGTTACCTGCAGCGCTATAATGGTATCAA GGGGCCGATCTTTGGCAAGACGTGTGGCCCTCGTTGGTTCGGCAGCTATCTGACCAATGGCGAACAGCCT CACAGTCTTGTTGTCGCGCCAACGCGCGCCGGCAAAGGCGTTGGCGTCGTTATTCCGACGCTCCTAACCT TCAAGGGTTCGGTGATAGCCCTCGACGTCAAAGGCGAGCTTTTTGAGCTGACTTCCAGAGCACGCAAAGC GGGCGGCGACGCCGTTTTCAAGTTCTCACCTCTGGATCCAGAGCGACGGACTCATTGTTACAATCCCGTC CTCGATATTGCAGCTTTACCGCCCGAGCGGCAGTTTACCGAGACGCGCCGCCTCGCCGCAAACCTCATCA CGGCCAAAGGCAAGGGAGCGGAAGGCTTTATCGACGGCGCGCGGGACCTTTTCGTTGCGGGCATCCTTAC CTGTATTGAGCGCGGTACGCCAACAATTGGTGCGGTCTACGACTTATTTGCTCAACCTGGAGAGAAGTAC AAACTTTTTGCGGACCTCGCGGAAGAAAGCCGAAATAAAGAGGCTCAGCGTATTTTCGACAATATGGCGG GTAACGACACGAAAATTTTGACTTCTTATACATCAGTGCTCGGCGACGGCGGACTTAACCTGTGGGCTGA TCCATTGGTTAAAGCAGCGACAAGTCGATCAGATTTTTCCGTCTATGATCTGCGTCGGAAGAGGACCTGC GTCTATCTTTGCGTCAGCCCCAACGACCTCGAGGTCGTGGCGCCATTGATGCGCCTCCTTTTTCAGCAGG TCGTGTCAATTCTGCAGCGATCACTGCCAGGTAAAGATGAGCGGCATGAAGTTTTGTTTCTCCTTGACGA ATTTAAACACCTGGGGAAGCTTGAGGCAATCGAGACCGCGATTACAACCATCGCCGGTTACAAAGGCCGC TTCATGTTTATTATTCAGAGTCTCTCGGCCTTGACGGGCACCTACGATGACGCGGGCAAACAAAACTTTC TCAGTAACACTGGCGTGCAAGTATTTATGGCCACGGCCGACGACGAAACACCGACCTATATCTCAAAAGC TATCGGCGACTATACGTTCAAGGCGCGTTCGACCTCATACAGTCAAGCCCGAATGTTCGATCATAACATC CAGATTTCCGATCAGGGGGCGCCGCTTTTGCGCCCCGAACAAGTGCGCTTGCTTGACGATAACAATGAAA TCGTCCTTATTAAAGGGCATCCGCCTCTCAAACTACGAAAGGTGCGATATTATTCCGATCGTATGCTGAG GCGCCTTTTCGAATGCCAAATTGGCGCCCTCCCTGAGCCCGCATCTTTGATGCTTTCGGAAGGTGTCCAT CGGGATGGGCAAGACCTCAGTCAACAAGCCGCCGTCACGGAGGCGCAGGGCTTAGGTGACATCGATTCGA TACCTAATAATATGGAAGCCGCTACACCGCAAAACAGTGAAATGGATGACGAGCAGGACAGCCTCCCAAC TGGAATTGACGTCCCCCAGGGCCTTATTGAAAGCGATGAGGTGAAAGAAGACGCCGGTGGCGTGGTGCCA GATTTCGGTGTTTCAGCTGAAATGGCTCCAGCTATGATTGCACAACAGCAGCTGCTGGAGCAGATCATTG CGCTTCAGCAACGATATGGACCCGCGTCCTCGCACTCGGTGAAATGA |