ICEberg
Choose the input sequences (< 50 equences) to run MUSCLE

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>ICEberg|941 gi|7679128586|ref|WP_050955401.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129232|ref|WP_014709359.1| site-specific integrase [Prevotella intermedia 17]
>ICEberg|941 gi|7679129233|ref|WP_014709360.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129234|ref|WP_004366620.1| DNA-binding protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129235|ref|WP_044047688.1| DNA-binding protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129236|ref|WP_004362427.1| DNA-binding protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129237|ref|WP_004366617.1| DNA-binding protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129238|ref|WP_014709361.1| DNA methylase [Prevotella intermedia 17]
>ICEberg|941 gi|7679129239|ref|WP_014709362.1| DUF1896 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129240|ref|WP_014709363.1| type IA DNA topoisomerase [Prevotella intermedia 17]
>ICEberg|941 gi|7679129241|ref|WP_014709364.1| DUF3945 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129242|ref|WP_014709365.1| ABC transporter ATP-binding protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129243|ref|WP_014709366.1| ABC transporter ATP-binding protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129244|ref|WP_044047689.1| TonB-dependent receptor [Prevotella intermedia 17]
>ICEberg|941 gi|7679129245|ref|WP_014709368.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129246|ref|WP_004341627.1| AraC family transcriptional regulator [Prevotella intermedia 17]
>ICEberg|941 gi|7679129247|ref|WP_004341628.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129251|ref|WP_004373337.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129252|ref|WP_004373338.1| sensor histidine kinase [Prevotella intermedia 17]
>ICEberg|941 gi|7679129253|ref|WP_004373340.1| DNA-binding response regulator [Prevotella intermedia 17]
>ICEberg|941 gi|7679129254|ref|WP_080574663.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129255|ref|WP_014709372.1| outer membrane lipoprotein-sorting protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129256|ref|WP_014709373.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129257|ref|WP_004366603.1| RteC protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129258|ref|WP_080574664.1| DUF1016 family protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129260|ref|WP_014709374.1| conjugal transfer protein TraG [Prevotella intermedia 17]
>ICEberg|941 gi|7679129261|ref|WP_014709375.1| relaxase [Prevotella intermedia 17]
>ICEberg|941 gi|7679129262|ref|WP_018920038.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129264|ref|WP_014709377.1| ParA family protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129265|ref|WP_044047699.1| DUF3408 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129266|ref|WP_014709379.1| DUF3408 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129267|ref|WP_014709380.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129268|ref|WP_044047700.1| ParA family protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129269|ref|WP_014709383.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129270|ref|WP_004365102.1| DUF4134 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129271|ref|WP_004584340.1| DUF4133 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129272|ref|WP_044047701.1| TraG family conjugative transposon ATPase [Prevotella intermedia 17]
>ICEberg|941 gi|7679129273|ref|WP_004332888.1| DUF4141 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129274|ref|WP_014709387.1| conjugative transposon protein TraJ [Prevotella intermedia 17]
>ICEberg|941 gi|7679129275|ref|WP_004341670.1| conjugative transposon protein TraK [Prevotella intermedia 17]
>ICEberg|941 gi|7679129276|ref|WP_044047704.1| DUF3989 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129277|ref|WP_076169320.1| conjugative transposon protein TraM [Prevotella intermedia 17]
>ICEberg|941 gi|7679129278|ref|WP_014709390.1| conjugative transposon protein TraN [Prevotella intermedia 17]
>ICEberg|941 gi|7679129279|ref|WP_014709391.1| conjugal transfer protein TraO [Prevotella intermedia 17]
>ICEberg|941 gi|7679129280|ref|WP_044047706.1| DNA primase [Prevotella intermedia 17]
>ICEberg|941 gi|7679129281|ref|WP_014709393.1| DUF3872 domain-containing protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129282|ref|WP_014709394.1| lysozyme [Prevotella intermedia 17]
>ICEberg|941 gi|7679129283|ref|WP_014709395.1| ATP-dependent endonuclease [Prevotella intermedia 17]
>ICEberg|941 gi|7679129284|ref|WP_044047708.1| helicase UvrD [Prevotella intermedia 17]
>ICEberg|941 gi|7679129285|ref|WP_005847779.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129286|ref|WP_014709397.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129287|ref|WP_014709398.1| PcfJ-like protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129288|ref|WP_004341683.1| antirestriction protein ArdA [Prevotella intermedia 17]
>ICEberg|941 gi|7679129289|ref|WP_014709399.1| PcfK-like protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129291|ref|WP_008564046.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129292|ref|WP_004341687.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129293|ref|WP_044047710.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129294|ref|WP_009162538.1| hypothetical protein [Prevotella intermedia 17]
>ICEberg|941 gi|7679129295|ref|WP_076169322.1| hypothetical protein [Prevotella intermedia 17]