I. Information of IME
Name BcenGI2  This is a predicted IME derived from literature
OrganismBurkholderia cenocepacia
Size (bp)16.4 kb
GC content [Genome] (%)
Insertion site3′ of a tRNAAla gene
Species that IME can be transferred to-
Nucleotide SequenceAM747720 (complete IME sequence in this genome)
Genome coordinates188011..204429
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of BcenGI2  is not available.

The graph information of BcenGI2  components from AM747720
Complete gene list of BcenGI2  from AM747720
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1BCAL0159183928..184539 [+], 612putative RlpA-like lipoprotein
2BCAL0160184618..185505 [-], 888putative methylase
3BCAL0161185552..185980 [+], 429conserved hypothetical protein
4gmhA186107..186691 [+], 585phosphoheptose isomerase
5BCAL0163186688..187509 [+], 822putative phospholipid-binding lipoprotein
6BCAL0164187506..187868 [+], 363putative cytochrome c-551 precursor
7BCAL0165188900..189877 [+], 978putative plasmid replication-associated protein
8BCAL0166190294..191130 [-], 837putative transposaseIntegrase 
9BCAL0167191130..191654 [-], 525putative transposase
10BCAL0169192105..192797 [-], 693conserved hypothetical protein
11BCAL0170192918..193169 [+], 252conserved hypothetical protein
12BCAL0171193147..193539 [+], 393putative plasmid conjugal transfer protein
13BCAL0172193882..194244 [+], 363putative plasmid conjugal transfer protein
14BCAL0173194371..195144 [+], 774putative plasmid conjugal transfer proteinTrbJ, T4SS component 
15BCAL0173a195154..195345 [+], 192hypothetical protein
16BCAL0174195365..196792 [+], 1428putative plasmid conjugal transfer proteinTrbL, T4SS component 
17BCAL0175196857..197147 [+], 291conserved hypothetical protein
18BCAL0176197138..197497 [+], 360conserved hypothetical protein
19BCAL0177197494..197796 [+], 303putative plasmid conjugal transfer protein
20BCAL0178198105..198917 [+], 813putative DNA methyltransferase
21BCAL0179198900..201533 [-], 2634hypothetical protein
22BCAL0180201536..202231 [-], 696putative membrane protein
23BCAL0181202239..202880 [-], 642conserved hypothetical protein
24BCAL0182203211..204338 [-], 1128putative plasmid recombinase
25gudD204567..205964 [-], 1398putative glucarate dehydratase
26gudP206027..207367 [-], 1341putative glucarate transporter
27BCAL0185207582..208505 [-], 924LysR family regulatory protein
28BCAL0186208597..209328 [+], 732putative glutathione S-transferase
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Bellanger X; Payot S; Leblond-Bourget N; Guedon G (2014). Conjugative and mobilizable genomic islands in bacteria: evolution and diversity. FEMS Microbiol Rev. 38(4):720-60. [PudMed:24372381]
(2) Graindorge A; Menard A; Monnez C; Cournoyer B (2012). Insertion sequence evolutionary patterns highlight convergent genetic inactivations and recent genomic island acquisitions among epidemic Burkholderia cenocepacia. J Med Microbiol. 61(Pt 3):394-409. [PudMed:21980044]
(3) Holden MT; Seth-Smith HM; Crossman LC; Sebaihia M; Bentley SD; Cerdeno-Tarraga AM; Thomson NR; Bason N; Quail MA; Sharp S; Cherevach I; Churcher C; Goodhead I; Hauser H; Holroyd N; Mungall K; Scott P; Walker D; White B; Rose H; Iversen P; Mil-Homens D; Rocha EP; Fialho AM; Baldwin A; Dowson C; Barrell BG; Govan JR; Vandamme P; Hart CA; Mahenthiralingam E; Parkhill J (2009). The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients. J Bacteriol. 191(1):261-77. [PudMed:18931103]