I. Information of IME
ICEberg ID266_IME
Name SGI1-PmVER This is a predicted IME derived from literature
OrganismProteus mirabilis PmVER
Size (bp)53323 bp
GC content [Genome] (%)
Insertion site3'-end of the trmE
FunctionaacCA5/aadA7 cassette; tetA(A); strB, strA; blaTEM-1b; aphA1a (resistance to kanamycin); a truncated sul1 gene
Species that IME can be transferred to-
Nucleotide SequenceJX121640 (complete IME sequence in this contig)
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-PmVER is not available.

The graph information of SGI1-PmVER components from JX121640
Complete gene list of SGI1-PmVER from JX121640
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1thdF1..468 [+], 468tRNA modification GTPase
2int672..1889 [+], 1218integrase
3xis1886..2254 [-], 369excisionase
4rep2612..3565 [-], 954replication protein
5S0043552..3842 [-], 291hypothetical protein
6orfB5654..6526 [-], 873IS1359 transposase; OrfB
7orfA6523..6867 [-], 345IS1359 transposase; OrfA
8S0107118..7372 [-], 255hypothetical protein
9S0117372..10776 [-], 3405conjugative transfer pilus assembly protein TraGTraG_F, T4SS component 
10S01210780..12204 [-], 1425conjugal transfer pilus assembly protein TraHTraH_F, T4SS component 
11S01312448..13305 [+], 858hypothetical protein
12S01413302..13697 [+], 396hypothetical protein
13S01514112..14381 [-], 270hypothetical protein
14S01614459..14644 [-], 186hypothetical protein
15S01714504..14758 [+], 255hypothetical protein
16S01814655..14972 [-], 318hypothetical protein
17S01915230..15526 [-], 297hypothetical protein
18S02015530..16495 [-], 966phage integrase family protein
19S02116588..16923 [+], 336hypothetical protein
20S02216835..17110 [-], 276hypothetical protein
21S02317471..19111 [-], 1641helicase
22S02419129..21054 [-], 1926ATP-dependent endonuclease
23S02521132..23675 [-], 2544subtilisin-like peptidase
24S02623696..24685 [-], 990AAA ATPase, central domain protein
25res24764..25348 [-], 585resolvase
26intI125622..26635 [-], 1014IntI1 integraseIntegrase 
27aacCA526793..27269 [+], 477aminoglycoside acetyltransferase
28aadA727345..28142 [+], 798aminoglycoside adenyltransferase
29qacEdelta128306..28653 [+], 348QacEdelta1
30sul128647..29486 [+], 840Sul1 dihydropteroate synthaseAR 
31tnpA610029830..30624 [+], 795IS6100 transposase
32merE31630..31866 [-], 237MerE
33merD31863..32228 [-], 366MerD
34merA32246..33928 [-], 1683MerA
35merC33980..34402 [-], 423MerC
36merP34438..34713 [-], 276MerP
37merT34727..35077 [-], 351MerT
38merR35149..35583 [+], 435MerR
39tetR(A)35789..36439 [-], 651TetR(A)
40tetA(A)36545..37744 [+], 1200TetA(A)AR 
41pecM37776..38660 [-], 885PecM
42tnpA39149..40945 [+], 1797transposase
43strB41484..42320 [-], 837StrB streptomycin phosphotransferaseAR 
44strA42320..43123 [-], 804StrA streptomycin phosphotransferaseAR 
45orfB43230..44087 [-], 858IS1133 transposase; OrfB
46orfD44084..44359 [-], 276IS1133 transposase; OrfD
47tnpA2644987..45691 [+], 705IS26 transposase
48blaTEM-1b46152..47012 [-], 861TEM-1b beta lactamaseAR 
49tnpR47194..47751 [-], 558Tn2 resolvase
50tnpA2647990..48694 [-], 705IS26 transposase
51aphA1a48845..49660 [+], 816AphA1aAR 
52tnpA2649850..50554 [-], 705IS26 transposase
53orf550916..51416 [+], 501Orf5 acetyltransferase
54orf651440..51727 [+], 288hypothetical protein
55tnpA610051893..52687 [+], 795IS6100 transposase
56S04453035..53664 [+], 630hypothetical protein
57hipB53940..54197 [+], 258transcriptional regulator
58hipA54198..55511 [+], 1314regulatory protein
59PMI312455914..56349 [+], 436membrane protein
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Siebor E; Neuwirth C (2013). Emergence of Salmonella genomic island 1 (SGI1) among Proteus mirabilis clinical isolates in Dijon, France. J Antimicrob Chemother. 68(8):1750-6. [PudMed:23580563]