I. Information of IME
ICEberg ID265_IME
Name SGI1-PmSCO This is a predicted IME derived from literature
OrganismProteus mirabilis PmSCO
Size (bp)41481 bp
GC content [Genome] (%)
Insertion site3'-end of the trmE
FunctionaacCA5/aadA7, floRc, tetA(G), blapse-1
Species that IME can be transferred to-
Nucleotide SequenceJX121639 (complete IME sequence in this contig)
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-PmSCO is not available.

The graph information of SGI1-PmSCO components from JX121639
Complete gene list of SGI1-PmSCO from JX121639
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1thdF1..468 [+], 468tRNA modification GTPase
2int672..1889 [+], 1218integrase
3xis1886..2254 [-], 369excisionase
4rep2612..3565 [-], 954replication protein
5S0043552..3842 [-], 291hypothetical protein
6overlap with orfA characteristic of IS3 family members5654..6526 [-], 873IS1359 transposase; OrfB
7-6523..6867 [-], 345IS1359 transposase; OrfA
8S0107118..7372 [-], 255hypothetical protein
9S0117372..10776 [-], 3405conjugative transfer pilus assembly protein TraGTraG_F, T4SS component 
10S01210780..12204 [-], 1425conjugal transfer pilus assembly protein TraHTraH_F, T4SS component 
11S01312448..13305 [+], 858hypothetical protein
12S01413302..13697 [+], 396hypothetical protein
13S01514112..14381 [-], 270hypothetical protein
14S01614459..14644 [-], 186hypothetical protein
15S01714504..14758 [+], 255hypothetical protein
16S01814655..14972 [-], 318hypothetical protein
17S01915230..15526 [-], 297hypothetical protein
18S02015530..16495 [-], 966phage integrase family protein
19S02116588..16923 [+], 336hypothetical protein
20S02216835..17110 [-], 276hypothetical protein
21S02317471..19111 [-], 1641helicase
22S02419129..21054 [-], 1926ATP-dependent endonuclease
23S02521132..23675 [-], 2544subtilisin-like peptidase
24S02623696..24685 [-], 990AAA ATPase, central domain protein
25res24764..25348 [-], 585resolvase
26intI125622..26635 [-], 1014IntI1 integraseIntegrase 
27aacCA526793..27269 [+], 477aminoglycoside acetyltransferase
28aadA727345..28142 [+], 798aminoglycoside adenyltransferase
29qacEdelta128306..28653 [+], 348QacEdelta1
30sul1 delta28647..29618 [+], 972Sul1delta fusion proteinAR 
31floRc29835..31049 [+], 1215chloramphenicol and florfenicol resistance proteinAR 
32tetR(G)31256..31882 [-], 627TetR(G)
33tetA(G)32034..33161 [+], 1128TetA(G)AR 
34-33182..33973 [+], 792putative LysR-type transcriptional regulator
35rcr334065..35549 [-], 1485Rcr3
36groEL/intI135824..36477 [-], 654GroEL/Integrase fusion protein
37pse-136683..37549 [+], 867PSE-1 beta-lactamaseAR 
38qacEdelta137766..38113 [+], 348QacEdelta1
39sul138107..38946 [+], 840Sul1 dihydropteroate synthaseAR 
40-39074..39574 [+], 501acetyltransferase
41-39598..39885 [+], 288hypothetical protein
42tnpA610040051..40845 [+], 795IS6100 transposase
43S04441193..41822 [+], 630hypothetical protein
44hipB42098..42355 [+], 258transcriptional regulator
45hipA42356..43669 [+], 1314regulatory protein
46PMI312444072..44504 [+], 433membrane protein
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Siebor E; Neuwirth C (2013). Emergence of Salmonella genomic island 1 (SGI1) among Proteus mirabilis clinical isolates in Dijon, France. J Antimicrob Chemother. 68(8):1750-6. [PudMed:23580563]