The graph information of SGI1-PmGUE components from JX121641 |
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Complete gene list of SGI1-PmGUE from JX121641 |
# | Gene | Coordinates [+/-], size (bp) | Product | *Reannotation |
1 | int | 672..1889 [+], 1218 | integrase | |
2 | xis | 1886..2254 [-], 369 | excisionase | |
3 | rep | 2612..3565 [-], 954 | replication protein | |
4 | S004 | 3552..3842 [-], 291 | hypothetical protein | |
5 | orfB | 5654..6526 [-], 873 | IS1359 transposase; OrfB | |
6 | orfA | 6523..6867 [-], 345 | IS1359 transposase; OrfA | |
7 | S010 | 7118..7372 [-], 255 | hypothetical protein | |
8 | S011 | 7372..10776 [-], 3405 | conjugative transfer pilus assembly protein TraG | TraG_F, T4SS component |
9 | S012 | 10780..12204 [-], 1425 | conjugal transfer pilus assembly protein TraH | TraH_F, T4SS component |
10 | S013 | 12448..13305 [+], 858 | hypothetical protein | |
11 | S014 | 13302..13697 [+], 396 | hypothetical protein | |
12 | S015 | 14112..14381 [-], 270 | hypothetical protein | |
13 | S016 | 14459..14644 [-], 186 | hypothetical protein | |
14 | S017 | 14504..14758 [+], 255 | hypothetical protein | |
15 | S018 | 14655..14972 [-], 318 | hypothetical protein | |
16 | S019 | 15230..15526 [-], 297 | hypothetical protein | |
17 | S020 | 15530..16495 [-], 966 | phage integrase family protein | |
18 | S021 | 16588..16923 [+], 336 | hypothetical protein | |
19 | S022 | 16835..17110 [-], 276 | hypothetical protein | |
20 | S023 | 17471..19111 [-], 1641 | helicase | |
21 | S024 | 19129..21054 [-], 1926 | ATP-dependent endonuclease | |
22 | S025 | 21132..23675 [-], 2544 | subtilisin-like peptidase | |
23 | S026 | 23696..24685 [-], 990 | AAA ATPase, central domain protein | |
24 | res | 24764..25348 [-], 585 | resolvase | |
25 | intI1 | 25622..26635 [-], 1014 | IntI1 integrase | |
26 | aacCA5 | 26793..27269 [+], 477 | aminoglycoside acetyltransferase | |
27 | aadA7 | 27345..28142 [+], 798 | aminoglycoside adenyltransferase | |
28 | qacEdelta1 | 28306..28653 [+], 348 | QacEdelta1 | |
29 | sul1 | 28647..29486 [+], 840 | Sul1 dihydropteroate synthase | AR |
30 | tnpA6100 | 29830..30624 [+], 795 | IS6100 transposase | |
31 | merE | 31630..31866 [-], 237 | MerE | |
32 | merD | 31863..32228 [-], 366 | MerD | |
33 | merA | 32246..33928 [-], 1683 | MerA | |
34 | merC | 33980..34402 [-], 423 | MerC | |
35 | merP | 34438..34713 [-], 276 | MerP | |
36 | merT | 34727..35077 [-], 351 | MerT | |
37 | merR | 35149..35583 [+], 435 | MerR | |
38 | tetR(A) | 35789..36439 [-], 651 | TetR(A) | |
39 | tetA(A) | 36545..37744 [+], 1200 | TetA(A) | AR |
40 | pecM | 37776..38660 [-], 885 | PecM | |
41 | tnpA | 39149..40945 [+], 1797 | transposase | |
42 | strB | 41484..42320 [-], 837 | StrB streptomycin phosphotransferase | AR |
43 | strA | 42320..43123 [-], 804 | StrA streptomycin phosphotransferase | AR |
44 | orfB | 43230..44087 [-], 858 | IS1133 transposase; OrfB | |
45 | orfD | 44084..44359 [-], 276 | IS1133 transposase; OrfD | |
46 | tnpA26 | 44987..45691 [+], 705 | IS26 transposase | |
47 | blaTEM-1b | 46152..47012 [-], 861 | TEM-1b beta lactamase | AR |
48 | tnpR | 47194..47751 [-], 558 | Tn2 resolvase | |
49 | tnpA26 | 47990..48694 [-], 705 | IS26 transposase | |
50 | aphA1a | 48845..49660 [+], 816 | AphA1a aminoglycoside phosphotransferase | AR |
51 | tnpA26 | 49850..50554 [-], 705 | IS26 transposase | |
52 | intI1 | 51091..52104 [-], 1014 | IntI1 integrase | Integrase |
53 | dfrA15 | 52261..52734 [+], 474 | DfrA15 dihydrofolate reductase | AR |
54 | qacEdelta1 | 52935..53282 [+], 348 | QacEdelta1 | |
55 | sul1delta | 53276..54247 [+], 972 | Sul1delta fusion protein | AR |
56 | floRc | 54464..55678 [+], 1215 | chloramphenicol and florfenicol resistance protein | AR |
57 | tetR(G) | 55885..56511 [-], 627 | TetR(G) | |
58 | tetA(G) | 56663..57790 [+], 1128 | TetA(G) | AR |
59 | - | 57811..58602 [+], 792 | putative LysR-type transcriptional regulator | |
60 | rcr3 | 58694..60178 [-], 1485 | Rcr3 | |
61 | groEL/intI1 | 60453..61106 [-], 654 | GroEL/Integrase fusion protein | |
62 | pse-1 | 61312..62178 [+], 867 | PSE-1 beta-lactamase | AR |
63 | qacEdelta1 | 62395..62742 [+], 348 | QacEdelta1 | |
64 | sul1 | 62736..63575 [+], 840 | Sul1 dihydropteroate synthase | AR |
65 | orf5 | 63703..64203 [+], 501 | Orf5 acetyltransferase | |
66 | orf6 | 64227..64514 [+], 288 | hypothetical protein | |
67 | tnpA6100 | 64680..65474 [+], 795 | IS6100 transposase | |
68 | S044 | 65822..66451 [+], 630 | hypothetical protein | |
69 | hipB | 66727..66984 [+], 258 | transcriptional regulator | |
70 | hipA | 66985..68298 [+], 1314 | regulatory protein | |
71 | PMI3124 | 68701..69137 [+], 437 | membrane protein | |