The graph information of SGI1-PmBRI components from JX089582 |
|
Complete gene list of SGI1-PmBRI from JX089582 |
# | Gene | Coordinates [+/-], size (bp) | Product | *Reannotation |
1 | thdF | 1..468 [+], 468 | tRNA modification GTPase | |
2 | int | 672..1889 [+], 1218 | integrase | |
3 | xis | 1886..2254 [-], 369 | excisionase | |
4 | rep | 2612..3565 [-], 954 | replication protein | |
5 | S004 | 3552..3842 [-], 291 | hypothetical protein | |
6 | S005 | 3930..6689 [-], 2760 | conjugal transfer mating pair stabilization protein TraN | TraN_F, T4SS component |
7 | S006 | 6786..7319 [-], 534 | putative regulator protein | |
8 | S007 | 7322..7933 [-], 612 | hypothetical protein | |
9 | S008 | 7933..8154 [-], 222 | hypothetical protein | |
10 | S009 | 8329..8619 [+], 291 | hypothetical protein | |
11 | S010 | 8639..8893 [-], 255 | hypothetical protein | |
12 | S011 | 8893..12297 [-], 3405 | conjugative transfer pilus assembly protein TraG | TraG_F, T4SS component |
13 | S012 | 12301..13725 [-], 1425 | conjugal transfer pilus assembly protein TraH | TraH_F, T4SS component |
14 | S013 | 13969..14826 [+], 858 | hypothetical protein | |
15 | S014 | 14823..15218 [+], 396 | hypothetical protein | |
16 | S015 | 15633..15902 [-], 270 | hypothetical protein | |
17 | S016 | 15980..16165 [-], 186 | hypothetical protein | |
18 | S017 | 16025..16279 [+], 255 | hypothetical protein | |
19 | S018 | 16176..16493 [-], 318 | hypothetical protein | |
20 | S019 | 16751..17047 [-], 297 | hypothetical protein | |
21 | S020 | 17051..18016 [-], 966 | phage integrase family protein | |
22 | S021 | 18109..18444 [+], 336 | hypothetical protein | |
23 | S022 | 18356..18631 [-], 276 | hypothetical protein | |
24 | S023 | 18992..20632 [-], 1641 | helicase | |
25 | S024 | 20650..22575 [-], 1926 | ATP-dependent endonuclease | |
26 | S025 | 22653..25196 [-], 2544 | subtilisin-like peptidase | |
27 | S026 | 25217..26206 [-], 990 | AAA ATPase, central domain protein | |
28 | res | 26285..26869 [-], 585 | resolvase | |
29 | intI1 | 27143..28156 [-], 1014 | IntI1 integrase | Integrase |
30 | aadA2 | 28302..29093 [+], 792 | AadA2 aminoglycoside adenylyltransferase | AR |
31 | qacEdelta1 | 29257..29604 [+], 348 | QacEdelta1 | |
32 | sul1 | 29598..30437 [+], 840 | Sul1 dihydropteroate synthase | AR |
33 | orf5 | 30565..31065 [+], 501 | Orf5 acetyltransferase | |
34 | orf6 | 31089..31376 [+], 288 | hypothetical protein | |
35 | tnpA6100 | 31542..32336 [+], 795 | IS6100 transposase | |
36 | S044 | 32684..33313 [+], 630 | hypothetical protein | |
37 | hipB | 33589..33846 [+], 258 | transcriptional regulator | |
38 | hipA | 33847..35160 [+], 1314 | regulatory protein | |
39 | PMI3124 | 35562..35995 [+], 434 | membrane protein | |