 ICEberg ID | 260_IME |
Name  | SGI1-K1  |
| Family | - |
| Organism | Salmonella enterica subsp. enterica serovar Kentucky |
| Size (bp) | - |
| GC content [Genome] (%) | |
| Insertion site | 3'-end of the trmE |
| Function | aadA7, sul1, mer, tetR, tet(A), pecM, tnpA, strB, strA, blaTEM-1 |
| Species that IME can be transferred to | - |
| Nucleotide Sequence | EU664602 (partical IME sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of SGI1-K1 components from EU664602 | |||||
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| Incomplete gene list of SGI1-K1 from EU664602 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product | *Reannotation | |
| 1 | orfB | 1334..2206 [-], 873 | putative transposase | Integrase | |
| 2 | orfA | 2203..2547 [-], 345 | putative transposase | ||
| 3 | S010 | 2798..3052 [-], 255 | hypothetical protein | ||
| 4 | S011 | 3052..3112 [-], 61 | putative pilus assembly protein | ||
| 5 | merR | 3213..3322 [+], 110 | merR repressor protein | ||
| 6 | tetR | 3528..4178 [-], 651 | tetracycline resistance repressor protein | ||
| 7 | tet(A) | 4284..5483 [+], 1200 | tetracycline resistance efflux pump | AR | |
| 8 | pecM | 5515..6399 [-], 885 | PecM like protein | ||
| 9 | tnpA | 6888..8684 [+], 1797 | transposase protein | ||
| 10 | strB | 9223..10059 [-], 837 | APH(6)-Id | AR | |
| 11 | strA | 10059..10862 [-], 804 | APH(3'')-Ib | AR | |
| 12 | orfB | 10969..11826 [-], 858 | putative transposase | ||
| 13 | orfA | 11823..12098 [-], 276 | putative transposase | ||
| 14 | tnpA | 12726..13430 [+], 705 | putative transposase | ||
| 15 | tnpR | 13669..14226 [+], 558 | putative resolvase protein | ||
| 16 | blaTEM-1 | 14408..15268 [+], 861 | TEM-1 | AR | |
| 17 | tnpA | 15729..16433 [-], 705 | putative transposase protein | ||
 Gene may contribute to site-specific recombination |
 Gene may be involved in adaptative function |
| (1) Doublet B; Praud K; Bertrand S; Collard JM; Weill FX; Cloeckaert A (2008). Novel insertion sequence- and transposon-mediated genetic rearrangements in genomic island SGI1 of Salmonella enterica serovar Kentucky. Antimicrob Agents Chemother. 52(10):3745-54. [PudMed:18676889] |