ICEberg

IME
Gene list
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References

I. Information of IME

ICEberg ID	254_IME
Name	SGI1-B2
Family	-
Organism	Proteus mirabilis PmSC17
Size (bp)	45929 bp
GC content [Genome] (%)
Insertion site	3'-end of the trmE
Function	-
Species that IME can be transferred to	-
Nucleotide Sequence	KP116299 (complete IME sequence in this contig)
Replicon	-
Coordinates	139..46067
Putative oriT region	-
Putative relaxase	coordinates: 25290..25595; Family: MOB_C

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-B2 is not available.

The graph information of SGI1-B2 components from KP116299

Complete gene list of SGI1-B2 from KP116299
#	Gene	Coordinates [+/-], size (bp)	Product	*Reannotation
1	trmE	1..156 [+], 156	tRNA modification GTPase
2	int	360..1577 [+], 1218	integrase
3	xis	1574..1942 [-], 369	excisionase
4	rep	2300..3253 [-], 954	replication protein
5	S004	3240..3530 [-], 291	hypothetical protein
6	S005	3618..6377 [-], 2760	conjugal transfer mating pair stabilization protein TraN	TraN_F, T4SS component
7	S006	6474..7007 [-], 534	putative regulator protein
8	S007	7010..7621 [-], 612	hypothetical protein
9	S008	7621..7842 [-], 222	hypothetical protein
10	S009	8017..8307 [+], 291	hypothetical protein
11	S010	8327..8581 [-], 255	hypothetical protein
12	S011	8581..11985 [-], 3405	conjugative transfer pilus assembly protein TraG	TraG_F, T4SS component
13	S012	11989..13413 [-], 1425	conjugal transfer pilus assembly protein TraH	TraH_F, T4SS component
14	S013	13657..14514 [+], 858	hypothetical protein
15	S014	14511..14906 [+], 396	hypothetical protein
16	S015	15321..15590 [-], 270	hypothetical protein
17	S016	15668..15853 [-], 186	hypothetical protein
18	S017	15713..15967 [+], 255	hypothetical protein
19	S018	15864..16181 [-], 318	hypothetical protein
20	S019	16439..16735 [-], 297	hypothetical protein
21	S020	16739..17704 [-], 966	phage integrase family protein
22	tnp	18035..18739 [+], 705	TnpA
23	tnpM	19085..19699 [-], 615	transposon Tn21 modulator protein
24	int	19638..20651 [-], 1014	integrase/recombinase	Integrase
25	dfrA17	20608..21282 [+], 675	dihydrofolate reductase	AR
26	aadA5	21413..22201 [+], 789	aminoglycoside adenyltransferase
27	qacEdelta1	22407..22754 [+], 348	QacEdelta1
28	sul1	22661..23587 [+], 927	dihydropteroate synthase	AR
29	chrA	24074..25279 [+], 1206	chromate transport protein
30	-	25290..25595 [+], 306	PadR family transcriptional regulator	Relaxase
31	tnpA6100	25786..26586 [+], 801	transposase
32	mphR	27079..27663 [-], 585	erythromycin resistance repressor protein
33	mrx	27663..28901 [-], 1239	Mrx
34	mph(A)	28898..29803 [-], 906	macrolide 2-phosphotransferase	AR
35	-	29925..30629 [-], 705	TnpA
36	S022	30813..31088 [-], 276	hypothetical protein
37	S023	31449..33089 [-], 1641	helicase
38	S024	33107..35032 [-], 1926	ATP-dependent endonuclease
39	S025	35110..37653 [-], 2544	subtilisin-like peptidase
40	S026	37674..38663 [-], 990	AAA ATPase, central domain protein
41	res	38742..39326 [-], 585	resolvase
42	intI1	39600..40613 [-], 1014	integrase
43	blaPSE-1	40819..41685 [+], 867	beta-lactamase	AR
44	qacEdelta1	41902..42249 [+], 348	QacEdelta1
45	sul1	42243..43082 [+], 840	dihydropteroate synthase	AR
46	-	43210..43710 [+], 501	acetyltransferase
47	-	43734..44021 [+], 288	hypothetical protein
48	-	44187..44981 [+], 795	IS6100 transposase
49	S044	45329..45958 [+], 630	hypothetical protein
50	hipB	46234..46491 [+], 258	transcriptional regulator
51	hipA	46492..47805 [+], 1314	regulatory protein
52	PMI3124	48208..48650 [+], 443	membrane protein

Flanking regions

Gene may contribute to site-specific recombination

Gene may play role in conjugative transfer

Gene may be involved in adaptative function

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	48	Fasta

(1) Lei CW; Zhang AY; Liu BH; Wang HN; Yang LQ; Guan ZB; Xu CW; Zhang DD; Yang YQ (2015). Two novel Salmonella genomic island 1 variants in Proteus mirabilis isolates from swine farms in China. Antimicrob Agents Chemother. 59(7):4336-8. [PudMed:25918148]