ICEberg

IME
Gene list
Download
References

I. Information of IME

ICEberg ID	252_IME
Name	SGI1-D
Family	-
Organism	Salmonella enterica Agona 953SA98
Size (bp)	37021 bp
GC content [Genome] (%)
Insertion site	3'-end of the trmE
Function	aadA2, sul1
Species that IME can be transferred to	-
Nucleotide Sequence	KU854986 (complete IME sequence in this contig)
Replicon	-
Coordinates	900..37920
Putative oriT region	-
Putative relaxase	-

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-D is not available.

The graph information of SGI1-D components from KU854986

Complete gene list of SGI1-D from KU854986
#	Gene	Coordinates [+/-], size (bp)	Product	*Reannotation
1	trmE	201..917 [+], 717	TrmE
2	intSGI1-D	1121..2338 [+], 1218	IntSGI1-D
3	S002	2335..2703 [-], 369	S002
4	rep	3061..4014 [-], 954	Rep
5	S004	4001..4291 [-], 291	S004
6	S005	4379..7138 [-], 2760	S005	TraN_F, T4SS component
7	S006	7235..7768 [-], 534	S006
8	-	7771..8382 [-], 612	S007
9	S008	8382..8603 [-], 222	S008
10	S009	8778..9068 [+], 291	S009
11	S010	9088..9342 [-], 255	orf
12	traG	9342..12746 [-], 3405	TraG	TraG_F, T4SS component
13	traH	12750..14174 [-], 1425	TraH	TraH_F, T4SS component
14	S013	14418..15275 [+], 858	S013
15	S014	15272..15667 [+], 396	S014
16	S015	16082..16351 [-], 270	S015
17	S016	16429..16614 [-], 186	S016
18	S017	16474..16728 [+], 255	S017
19	S018	16625..16942 [-], 318	S018
20	S019	17200..17496 [-], 297	S019
21	int	17500..18465 [-], 966	Int
22	S021	18558..18893 [+], 336	S021
23	S022	18805..19080 [-], 276	S022
24	S023	19441..21081 [-], 1641	putative helicase
25	S024	21099..23024 [-], 1926	S024
26	S025	23102..25645 [-], 2544	S025
27	S026	25666..26655 [-], 990	S026
28	resG	26734..27318 [-], 585	ResG
29	intI1	27592..28605 [-], 1014	IntI1 integrase	Integrase
30	qacEdelta1	29706..30053 [+], 348	QacEdelta1
31	rcr1	31291..32832 [+], 1542	Rcr1
32	dfrA10	33219..33782 [+], 564	DfrA10	AR
33	qacEdelta1	33819..34166 [+], 348	QacEdelta1
34	sul1	34160..34999 [+], 840	Sul1	AR
35	-	35127..35627 [+], 501	orf5
36	-	35651..35938 [+], 288	orf6
37	tnp6100	36104..36898 [+], 795	Tnp6100
38	S044	37246..37875 [+], 630	S044
39	yidY	38185..39372 [+], 1188	YidY	AR

Flanking regions

Gene may contribute to site-specific recombination

Gene may play role in conjugative transfer

Gene may be involved in adaptative function

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	37	Fasta