I. Information of IME
ICEberg ID252_IME
Name SGI1-D This is a predicted IME derived from literature
OrganismSalmonella enterica Agona 953SA98
Size (bp)37021 bp
GC content [Genome] (%)
Insertion site3'-end of the trmE
FunctionaadA2, sul1
Species that IME can be transferred to-
Nucleotide SequenceKU854986 (complete IME sequence in this contig)
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-D is not available.

The graph information of SGI1-D components from KU854986
Complete gene list of SGI1-D from KU854986
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1trmE201..917 [+], 717TrmE
2intSGI1-D1121..2338 [+], 1218IntSGI1-D
3S0022335..2703 [-], 369S002
4rep3061..4014 [-], 954Rep
5S0044001..4291 [-], 291S004
6S0054379..7138 [-], 2760S005TraN_F, T4SS component 
7S0067235..7768 [-], 534S006
8-7771..8382 [-], 612S007
9S0088382..8603 [-], 222S008
10S0098778..9068 [+], 291S009
11S0109088..9342 [-], 255orf
12traG9342..12746 [-], 3405TraGTraG_F, T4SS component 
13traH12750..14174 [-], 1425TraHTraH_F, T4SS component 
14S01314418..15275 [+], 858S013
15S01415272..15667 [+], 396S014
16S01516082..16351 [-], 270S015
17S01616429..16614 [-], 186S016
18S01716474..16728 [+], 255S017
19S01816625..16942 [-], 318S018
20S01917200..17496 [-], 297S019
21int17500..18465 [-], 966Int
22S02118558..18893 [+], 336S021
23S02218805..19080 [-], 276S022
24S02319441..21081 [-], 1641putative helicase
25S02421099..23024 [-], 1926S024
26S02523102..25645 [-], 2544S025
27S02625666..26655 [-], 990S026
28resG26734..27318 [-], 585ResG
29intI127592..28605 [-], 1014IntI1 integraseIntegrase 
30qacEdelta129706..30053 [+], 348QacEdelta1
31rcr131291..32832 [+], 1542Rcr1
32dfrA1033219..33782 [+], 564DfrA10AR 
33qacEdelta133819..34166 [+], 348QacEdelta1
34sul134160..34999 [+], 840Sul1AR 
35-35127..35627 [+], 501orf5
36-35651..35938 [+], 288orf6
37tnp610036104..36898 [+], 795Tnp6100
38S04437246..37875 [+], 630S044
39yidY38185..39372 [+], 1188YidYAR 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta