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IME
Gene list
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References
I. Information of IME
ICEberg ID
252_IME
Name
SGI1-D
Family
-
Organism
Salmonella enterica
Agona 953SA98
Size (bp)
37021 bp
GC content [Genome] (%)
Insertion site
3'-end of the
trmE
Function
aadA2
,
sul1
Species that IME can be transferred to
-
Nucleotide Sequence
KU854986
(complete IME sequence in this contig)
Replicon
-
Coordinates
900..37920
Putative
oriT
region
-
Putative relaxase
-
II. IME interaction with ICE/CIME/Plasmids
The interaction information of SGI1-D is not available.
The graph information of SGI1-D components from
KU854986
Complete gene list of SGI1-D from
KU854986
#
Gene
Coordinates [+/-], size (bp)
Product
*Reannotation
1
trmE
201..917 [+], 717
TrmE
2
intSGI1-D
1121..2338 [+], 1218
IntSGI1-D
3
S002
2335..2703 [-], 369
S002
4
rep
3061..4014 [-], 954
Rep
5
S004
4001..4291 [-], 291
S004
6
S005
4379..7138 [-], 2760
S005
TraN_F, T4SS component
7
S006
7235..7768 [-], 534
S006
8
-
7771..8382 [-], 612
S007
9
S008
8382..8603 [-], 222
S008
10
S009
8778..9068 [+], 291
S009
11
S010
9088..9342 [-], 255
orf
12
traG
9342..12746 [-], 3405
TraG
TraG_F, T4SS component
13
traH
12750..14174 [-], 1425
TraH
TraH_F, T4SS component
14
S013
14418..15275 [+], 858
S013
15
S014
15272..15667 [+], 396
S014
16
S015
16082..16351 [-], 270
S015
17
S016
16429..16614 [-], 186
S016
18
S017
16474..16728 [+], 255
S017
19
S018
16625..16942 [-], 318
S018
20
S019
17200..17496 [-], 297
S019
21
int
17500..18465 [-], 966
Int
22
S021
18558..18893 [+], 336
S021
23
S022
18805..19080 [-], 276
S022
24
S023
19441..21081 [-], 1641
putative helicase
25
S024
21099..23024 [-], 1926
S024
26
S025
23102..25645 [-], 2544
S025
27
S026
25666..26655 [-], 990
S026
28
resG
26734..27318 [-], 585
ResG
29
intI1
27592..28605 [-], 1014
IntI1 integrase
Integrase
30
qacEdelta1
29706..30053 [+], 348
QacEdelta1
31
rcr1
31291..32832 [+], 1542
Rcr1
32
dfrA10
33219..33782 [+], 564
DfrA10
AR
33
qacEdelta1
33819..34166 [+], 348
QacEdelta1
34
sul1
34160..34999 [+], 840
Sul1
AR
35
-
35127..35627 [+], 501
orf5
36
-
35651..35938 [+], 288
orf6
37
tnp6100
36104..36898 [+], 795
Tnp6100
38
S044
37246..37875 [+], 630
S044
39
yidY
38185..39372 [+], 1188
YidY
AR
Flanking regions
Gene may contribute to site-specific recombination
Gene may play role in conjugative transfer
Gene may be involved in adaptative function
Element
No. of sequences
Download
Nucleotide sequences
1
Fasta
Proteins
37
Fasta
-