ICEberg

IME
Gene list
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References

I. Information of IME

ICEberg ID	233_IME
Name	SGI1-Y
Family	-
Organism	Proteus mirabilis PmX60
Size (bp)	33560 bp
GC content [Genome] (%)
Insertion site	3'-end of the trmE
Function	aacCA5, aadA7, sul1
Species that IME can be transferred to	-
Nucleotide Sequence	KJ186149 (complete IME sequence in this contig)
Replicon	-
Coordinates	146..33705
Putative oriT region	-
Putative relaxase	-

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-Y is not available.

The graph information of SGI1-Y components from KJ186149

Complete gene list of SGI1-Y from KJ186149
#	Gene	Coordinates [+/-], size (bp)	Product	*Reannotation
1	thdF	1..163 [+], 163	tRNA modification GTPase
2	int	367..1584 [+], 1218	integrase
3	xis	1581..1949 [-], 369	excisionase
4	rep	2307..3260 [-], 954	replication protein
5	-	3247..3537 [-], 291	hypothetical protein
6	-	3625..6384 [-], 2760	putative mating pair stabilization protein	TraN_F, T4SS component
7	-	6481..7014 [-], 534	putative regulator protein
8	-	7017..7628 [-], 612	hypothetical protein
9	-	7628..7849 [-], 222	hypothetical protein
10	-	8024..8314 [+], 291	hypothetical protein
11	-	8334..8588 [-], 255	hypothetical protein
12	-	8588..11992 [-], 3405	putative pilus assembly protein	TraG_F, T4SS component
13	-	11996..13420 [-], 1425	putative pilus assembly protein	TraH_F, T4SS component
14	-	13664..14521 [+], 858	hypothetical protein
15	-	14518..14913 [+], 396	hypothetical protein
16	-	15328..15597 [-], 270	hypothetical protein
17	-	15675..15860 [-], 186	hypothetical protein
18	-	15720..15974 [+], 255	hypothetical protein
19	-	15871..16188 [-], 318	hypothetical protein
20	-	16446..16742 [-], 297	hypothetical protein
21	-	16746..17711 [-], 966	putative integrase
22	-	17804..18139 [+], 336	hypothetical protein
23	-	18051..18326 [-], 276	hypothetical protein
24	-	18687..20327 [-], 1641	putative helicase
25	-	20345..22270 [-], 1926	putative exonuclease
26	-	22348..24891 [-], 2544	putative subtilisin proteinase-like protein
27	-	24912..25901 [-], 990	putative ATPase
28	res	25980..26564 [-], 585	resolvase
29	intI1	26838..27851 [-], 1014	IntI1 integrase	Integrase
30	aac(3)-Id	28009..28485 [+], 477	aminoglycoside acetyltransferase
31	aadA7	28561..29358 [+], 798	aminoglycoside adenyltransferase
32	qacEdelta1	29522..29869 [+], 348	QacEdelta1
33	sul1	29863..30702 [+], 840	Sul1 dihydropteroate synthase	AR
34	-	30830..31330 [+], 501	acetyltransferase
35	-	31354..31641 [+], 288	hypothetical protein
36	-	31807..32601 [+], 795	IS6100 transposase
37	-	32949..33578 [+], 630	hypothetical protein
38	-	34115..34537 [+], 423	membrane protein

Flanking regions

Gene may contribute to site-specific recombination

Gene may play role in conjugative transfer

Gene may be involved in adaptative function

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	36	Fasta

(1) Lei CW; Zhang AY; Liu BH; Wang HN; Guan ZB; Xu CW; Xia QQ; Cheng H; Zhang DD (2014). Molecular characteristics of Salmonella genomic island 1 in Proteus mirabilis isolates from poultry farms in China. Antimicrob Agents Chemother. 58(12):7570-2. [PudMed:25267683]