ICEberg

IME
Gene list
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References

I. Information of IME

ICEberg ID	232_IME
Name	SGI1-X
Family	-
Organism	Proteus mirabilis PmC162
Size (bp)	38423 bp
GC content [Genome] (%)
Insertion site	3'-end of the trmE
Function	dfrA25, qnrB2, sul1
Species that IME can be transferred to	-
Nucleotide Sequence	KJ186154 (complete IME sequence in this contig)
Replicon	-
Coordinates	139..38561
Putative oriT region	-
Putative relaxase	-

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-X is not available.

The graph information of SGI1-X components from KJ186154

Complete gene list of SGI1-X from KJ186154
#	Gene	Coordinates [+/-], size (bp)	Product	*Reannotation
1	thdF	1..156 [+], 156	thiopene and furan oxidation protein
2	int	360..1577 [+], 1218	integrase
3	xis	1574..1942 [-], 369	excisionase
4	rep	2300..3253 [-], 954	replication protein
5	-	3240..3530 [-], 291	hypothetical protein
6	-	3618..6377 [-], 2760	putative mating pair stabilization protein	TraN_F, T4SS component
7	-	6474..7007 [-], 534	putative regulator protein
8	-	7010..7621 [-], 612	hypothetical protein
9	-	7621..7842 [-], 222	hypothetical protein
10	-	8017..8307 [+], 291	hypothetical protein
11	-	8327..8581 [-], 255	hypothetical protein
12	-	8581..11985 [-], 3405	putative pilus assembly protein	TraG_F, T4SS component
13	-	11989..13413 [-], 1425	putative pilus assembly protein	TraH_F, T4SS component
14	-	13657..14514 [+], 858	hypothetical protein
15	-	14511..14906 [+], 396	hypothetical protein
16	-	15321..15590 [-], 270	hypothetical protein
17	-	15668..15853 [-], 186	hypothetical protein
18	-	15713..15967 [+], 255	hypothetical protein
19	-	15864..16181 [-], 318	hypothetical protein
20	-	16439..16735 [-], 297	hypothetical protein
21	-	16739..17704 [-], 966	putative integrase
22	-	17797..18132 [+], 336	hypothetical protein
23	-	18044..18319 [-], 276	hypothetical protein
24	-	18680..20320 [-], 1641	putative helicase
25	-	20338..22263 [-], 1926	putative exonuclease
26	-	22341..24884 [-], 2544	putative subtilisin proteinase-like protein
27	-	24905..25894 [-], 990	putative ATPase
28	res	25973..26557 [-], 585	resolvase
29	intI1	26831..27844 [-], 1014	integrase	Integrase
30	dfrA25	28015..28473 [+], 459	dihydrofolate reductase	AR
31	sul1	28998..29837 [+], 840	Sul1 dihydropteroate synthase
32	-	30551..31783 [+], 1233	putative recombinase
33	-	33081..33542 [+], 462	hypothetical protein
34	qnrB2	33584..34228 [-], 645	quinolone resistance protein	AR
35	pspF	34324..34614 [-], 291	putative transcriptional activator
36	sul1	34719..35558 [+], 840	Sul1 dihydropteroate synthase	AR
37	-	35686..36186 [+], 501	acetyltransferase
38	-	36210..36497 [+], 288	hypothetical protein
39	-	36663..37457 [+], 795	IS6100 transposase
40	-	37805..38434 [+], 630	hypothetical protein
41	hipB	38710..38967 [+], 258	transcriptional regulator
42	hipA	38968..40281 [+], 1314	regulatory protein
43	-	40684..41111 [+], 428	membrane protein

Flanking regions

Gene may contribute to site-specific recombination

Gene may play role in conjugative transfer

Gene may be involved in adaptative function

Element	No. of sequences	Download
Nucleotide sequences	1	Fasta
Proteins	39	Fasta

(1) Lei CW; Zhang AY; Liu BH; Wang HN; Guan ZB; Xu CW; Xia QQ; Cheng H; Zhang DD (2014). Molecular characteristics of Salmonella genomic island 1 in Proteus mirabilis isolates from poultry farms in China. Antimicrob Agents Chemother. 58(12):7570-2. [PudMed:25267683]