ICEberg
I. Information of IME
ICEberg ID229_IME
Name SGI1-U This is a predicted IME derived from literature
Family-
OrganismProteus mirabilis S820302
Size (bp)-
GC content [Genome] (%)
Insertion site3'-end of the trmE
FunctiondfrA5, sul1
Species that IME can be transferred to-
Nucleotide SequenceHM747960; HM747961 (partical IME sequence)
Putative oriT region -
Putative relaxase -


II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-U is not available.


The graph information of SGI1-U components from HM747960
Incomplete gene list of SGI1-U from HM747960
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1-1..97 [+], 97hypothetical protein
2-621..675 [+], 55membrane protein

The graph information of SGI1-U components from HM747961
Incomplete gene list of SGI1-U from HM747961
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1dfrV117..590 [+], 474dihydrofolate reductaseAR 
 
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences2Fasta
Proteins3Fasta
(1) Bi S; Yan H; Chen M; Zhang Z; Shi L; Wang H (2011). New variant Salmonella genomic island 1-U in Proteus mirabilis clinical and food isolates from South China. J Antimicrob Chemother. 66(5):1178-9. [PudMed:21393148]
 

Genomics & Bioinformatics Group in MML, SJTU