I. Information of IME
ICEberg ID222_IME
Name SGI1-PmABB This is a predicted IME derived from literature
OrganismProteus mirabilis PmVER
Size (bp)32021 bp
GC content [Genome] (%)
Insertion site3'-end of the trmE
Species that IME can be transferred to-
Nucleotide SequenceJX121638 (complete IME sequence in this contig)
Putative oriT region -
Putative relaxase -

II. IME interaction with ICE/CIME/Plasmids

The interaction information of SGI1-PmABB is not available.

The graph information of SGI1-PmABB components from JX121638
Complete gene list of SGI1-PmABB from JX121638
#GeneCoordinates [+/-], size (bp) Product *Reannotation 
1thdF1..468 [+], 468tRNA modification GTPase
2int672..1889 [+], 1218integrase
3xis1886..2254 [-], 369excisionase
4rep2612..3565 [-], 954replication protein
5S0043552..3842 [-], 291hypothetical protein
6orfB5654..6526 [-], 873IS1359 transposase; OrfB
7orfA6523..6867 [-], 345IS1359 transposase; OrfA
8S0107118..7372 [-], 255hypothetical protein
9S0117372..10776 [-], 3405conjugative transfer pilus assembly protein TraGTraG_F, T4SS component 
10S01210780..12204 [-], 1425conjugal transfer pilus assembly protein TraHTraH_F, T4SS component 
11S01312448..13305 [+], 858hypothetical protein
12S01413302..13697 [+], 396hypothetical protein
13S01514112..14381 [-], 270hypothetical protein
14S01614459..14644 [-], 186hypothetical protein
15S01714504..14758 [+], 255hypothetical protein
16S01814655..14972 [-], 318hypothetical protein
17S01915230..15526 [-], 297hypothetical protein
18S02015530..16495 [-], 966phage integrase family protein
19S02116588..16923 [+], 336hypothetical protein
20S02216835..17110 [-], 276hypothetical protein
21S02317471..19111 [-], 1641helicase
22S02419129..21054 [-], 1926ATP-dependent endonuclease
23S02521132..23675 [-], 2544subtilisin-like peptidase
24S02623696..24685 [-], 990AAA ATPase, central domain protein
25res24764..25348 [-], 585resolvase
26intI125622..26635 [-], 1014IntI1 integraseIntegrase 
27aacCA526793..27269 [+], 477aminoglycoside acetyltransferase
28aadA727345..28142 [+], 798aminoglycoside adenyltransferase
29qacEdelta128306..28653 [+], 348QacEdelta1
30sul128647..29486 [+], 840Sul1 dihydropteroate synthaseAR 
31orf529614..30114 [+], 501Orf5 acetyltransferase
32orf630138..30425 [+], 288hypothetical protein
33tnpA610030591..31385 [+], 795IS6100 transposase
34S04431733..32362 [+], 630hypothetical protein
35hipB32638..32895 [+], 258transcriptional regulator
36hipA32896..34209 [+], 1314regulatory protein
37PMI312434612..35045 [+], 434membrane protein
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
(1) Soliman AM; Ahmed AM; Shimamoto T; El-Domany RA; Nariya H; Shimamoto T (2017). First report in Africa of two clinical isolates of Proteus mirabilis carrying Salmonella genomic island (SGI1) variants, SGI1-PmABB and SGI1-W. Infect Genet Evol. 51:132-137. [PudMed:28359833]